| ID | hsa_circ_0000566 | |||||
| Alias | hsa_circ_002156 | |||||
| Position | chr14:97299803-97327072 | |||||
| Strand | + | |||||
| Genomic length | 27269 | |||||
| Spliced sequence length | 1073 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_003384 | |||||
| Gene symbol | VRK1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | HEK293 | 5 | 5 | 4 | 0 | neutr | 3 | 3 | 2 | 2 | cd_19 | 28 | 11 | 33 | 7 | cd_34 | 17 | 3 | 12 | 2 |
| Rybak2015 | occipital_lobe | 95 | 52 | 29 | 32 | cerebellum | 49 | 39 | 35 | 44 | Sy5y_exp1_D2 | 15 | 12 | 8 | 16 | parietal_lobe | 58 | 44 | 19 | 47 | SY5Y_exp2_D4 | 2 | 2 | 5 | 16 | Sy5y_exp1_D4 | 11 | 10 | 10 | 23 | frontal_cortex | 191 | 79 | 32 | 44 | Sy5y_exp1_D0 | 19 | 11 | 13 | 31 | temporal_lobe | 52 | 31 | 26 | 42 | SY5Y_exp2_D0 | 3 | 3 | 9 | 26 | diencephalon | 68 | 53 | 34 | 52 |
| Maass2017 | platelets | 10 | 7 | 0 | 3 | WAS2 | 6 | 5 | 13 | 15 | ada_scid | 2 | 2 | 13 | 13 | MSC_047 | 2 | 2 | 0 | 0 | vena_cava | 2 | 2 | 3 | 3 | LCL | 7 | 5 | 12 | 18 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||