| ID | hsa_circ_0000514 | |||||
| Alias | hsa_circ_002172 | |||||
| Position | chr14:20811305-20811436 | |||||
| Strand | - | |||||
| Genomic length | 131 | |||||
| Spliced sequence length | 131 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NR_002312 | |||||
| Gene symbol | RPPH1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | cd_19 | 11 | 5 | 0 | 0 | HEK293 | 1 | 1 | 0 | 0 | cd_34 | 72 | 13 | 0 | 0 | neutr | 15 | 9 | 0 | 0 |
| Maass2017 | HUVEC | 4 | 4 | 0 | 0 | WAS2 | 6 | 5 | 0 | 0 | right_atrium | 3 | 3 | 0 | 0 | decidua | 10 | 7 | 0 | 0 | EPC | 10 | 9 | 0 | 0 | VSMC | 4 | 4 | 0 | 0 | LCL | 3 | 3 | 0 | 0 | neutophils | 3 | 2 | 0 | 0 | chondrocytes | 6 | 4 | 0 | 0 | vena_cava | 15 | 11 | 0 | 0 | osteocytes | 5 | 4 | 0 | 0 | MSC | 9 | 5 | 0 | 0 | HUAEC | 21 | 14 | 0 | 0 | platelets | 3 | 3 | 0 | 0 | muscle | 6 | 6 | 0 | 0 | MSC_047 | 17 | 7 | 0 | 0 | cortex | 11 | 9 | 0 | 0 | fibroblasts | 4 | 4 | 0 | 0 |
| Rybak2015 | cerebellum | 466 | 190 | 0 | 5 | Sy5y_exp1_D2 | 121 | 50 | 0 | 0 | SY5Y_exp2_D4 | 50 | 23 | 0 | 0 | Sy5y_exp1_D4 | 64 | 29 | 0 | 0 | SY5Y_exp2_D8 | 41 | 23 | 0 | 0 | Sy5y_exp1_D0 | 114 | 52 | 0 | 0 | SY5Y_exp2_D0 | 53 | 27 | 0 | 0 | frontal_cortex | 2258 | 372 | 2 | 0 | diencephalon | 352 | 165 | 0 | 0 | parietal_lobe | 385 | 144 | 0 | 0 | temporal_lobe | 2595 | 453 | 0 | 0 | occipital_lobe | 361 | 124 | 0 | 0 |
| Jeck2013 | Hs68_control | 383 | 102 | 0 | 0 | Hs68_RNase | 3877 | 619 | 3 | 12 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||