| ID | hsa_circ_0000448 | |||||
| Alias | hsa_circ_000153 | |||||
| Position | chr12:120592773-120593523 | |||||
| Strand | - | |||||
| Genomic length | 750 | |||||
| Spliced sequence length | 389 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_006836 | |||||
| Gene symbol | GCN1L1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | frontal_cortex | 229 | 90 | 45 | 23 | occipital_lobe | 144 | 71 | 42 | 30 | SY5Y_exp2_D0 | 3 | 3 | 26 | 23 | temporal_lobe | 88 | 51 | 24 | 11 | diencephalon | 79 | 52 | 34 | 18 | cerebellum | 62 | 58 | 41 | 36 | parietal_lobe | 67 | 47 | 43 | 24 | Sy5y_exp1_D4 | 2 | 2 | 29 | 16 | Sy5y_exp1_D0 | 10 | 8 | 49 | 36 | Sy5y_exp1_D2 | 5 | 5 | 33 | 27 |
| Jeck2013 | Hs68_control | 31 | 19 | 33 | 18 | Hs68_RNase | 982 | 224 | 19 | 10 |
| Maass2017 | WAS2 | 6 | 5 | 14 | 10 | LCL | 4 | 4 | 4 | 2 | ada_scid | 3 | 3 | 11 | 5 |
| Memczak2013 | HEK293 | 1 | 1 | 10 | 2 | cd_19 | 6 | 3 | 16 | 2 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||