| ID | hsa_circ_0000437 | |||||
| Alias | hsa_circ_002167 | |||||
| Position | chr12:109046047-109048186 | |||||
| Strand | - | |||||
| Genomic length | 2139 | |||||
| Spliced sequence length | 251 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_014325 | |||||
| Gene symbol | CORO1C | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | parietal_lobe | 1180 | 286 | 134 | 86 | SY5Y_exp2_D8 | 7 | 7 | 19 | 10 | frontal_cortex | 2582 | 361 | 157 | 95 | occipital_lobe | 1660 | 326 | 136 | 84 | cerebellum | 506 | 220 | 116 | 74 | SY5Y_exp2_D4 | 4 | 4 | 21 | 13 | Sy5y_exp1_D0 | 11 | 10 | 40 | 29 | Sy5y_exp1_D2 | 7 | 6 | 34 | 18 | Sy5y_exp1_D4 | 5 | 5 | 39 | 22 | temporal_lobe | 1720 | 292 | 111 | 74 | diencephalon | 720 | 254 | 181 | 98 |
| Memczak2013 | cd_34 | 57 | 9 | 0 | 3 | HEK293 | 4 | 4 | 7 | 12 | cd_19 | 17 | 5 | 1 | 2 |
| Maass2017 | WAS2 | 20 | 17 | 28 | 18 | MSC_047 | 3 | 3 | 27 | 17 | EPC | 3 | 3 | 24 | 16 | neutophils | 4 | 4 | 11 | 0 | decidua | 4 | 4 | 16 | 6 | right_atrium | 6 | 6 | 4 | 3 | umbilical_cord | 5 | 5 | 10 | 4 | HUAEC | 8 | 4 | 28 | 22 | ada_scid | 5 | 5 | 16 | 8 | LCL | 5 | 5 | 15 | 11 | fibroblasts | 5 | 4 | 11 | 7 | VSMC | 2 | 2 | 18 | 9 | platelets | 493 | 74 | 28 | 16 | vena_cava | 24 | 17 | 3 | 2 | muscle | 8 | 7 | 6 | 3 | MSC | 4 | 4 | 14 | 10 | chondrocytes | 6 | 6 | 16 | 6 | adipose | 14 | 11 | 15 | 9 |
| Salzman2013 | Gm12878 | 321 | 103 | 148 | 140 | K562 | 532 | 237 | 433 | 355 | Sknshra | 121 | 49 | 106 | 58 | Huvec | 132 | 29 | 156 | 73 | H1hesc | 88 | 34 | 108 | 110 | Ag04450 | 638 | 174 | 273 | 193 | Mcf7 | Nhek | 279 | 72 | 221 | 197 | Hepg2 | 43 | 15 | 92 | 35 | Hsmm | 66 | 11 | 126 | 43 | A549 | 159 | 65 | 158 | 98 | Helas3 | 48 | 23 | 116 | 39 | Bj | 226 | 79 | 184 | 117 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||