| ID | hsa_circ_0000408 | |||||
| Alias | hsa_circ_002140 | |||||
| Position | chr12:56824664-56826308 | |||||
| Strand | - | |||||
| Genomic length | 1644 | |||||
| Spliced sequence length | 378 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_003920 | |||||
| Gene symbol | TIMELESS | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Hepg2 | 46 | 8 | 29 | 13 | Ag04450 | 9 | 9 | 4 | 4 | Bj | 10 | 5 | 8 | 3 | A549 | 15 | 4 | 53 | 17 | Gm12878 | 11 | 8 | 10 | 4 | K562 | 9 | 8 | 39 | 22 | H1hesc | 9 | 7 | 65 | 39 |
| Jeck2013 | Hs68_RNase | 47 | 35 | 30 | 13 | Hs68_control | 3 | 3 | 42 | 29 |
| Memczak2013 | cd_19 | 13 | 8 | 1 | 8 | cd_34 | 28 | 3 | 3 | 0 |
| Rybak2015 | temporal_lobe | 4 | 3 | 11 | 12 | cerebellum | 5 | 5 | 25 | 14 | occipital_lobe | 4 | 3 | 24 | 11 | parietal_lobe | 4 | 2 | 23 | 17 | diencephalon | 7 | 6 | 26 | 18 | frontal_cortex | 7 | 5 | 24 | 15 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||