| ID | hsa_circ_0000392 | |||||
| Alias | hsa_circ_000139 | |||||
| Position | chr12:42604156-42604482 | |||||
| Strand | - | |||||
| Genomic length | 326 | |||||
| Spliced sequence length | 326 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001190979 | |||||
| Gene symbol | YAF2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | occipital_lobe | 118 | 61 | 7 | 19 | SY5Y_exp2_D8 | 2 | 2 | 0 | 3 | frontal_cortex | 246 | 120 | 5 | 25 | Sy5y_exp1_D4 | 4 | 3 | 3 | 6 | diencephalon | 70 | 53 | 4 | 32 | SY5Y_exp2_D4 | 2 | 2 | 0 | 0 | cerebellum | 81 | 69 | 2 | 17 | parietal_lobe | 152 | 94 | 3 | 18 | Sy5y_exp1_D0 | 5 | 4 | 0 | 2 | Sy5y_exp1_D2 | 3 | 2 | 0 | 3 | temporal_lobe | 59 | 23 | 4 | 14 |
| Memczak2013 | neutr | 4 | 2 | 0 | 1 | |
| Jeck2013 | Hs68_control | 1 | 1 | 1 | 5 | Hs68_RNase | 93 | 56 | 6 | 3 |
| Maass2017 | vena_cava | 2 | 2 | 0 | 2 | ada_scid | 2 | 2 | 0 | 0 | WAS2 | 5 | 5 | 0 | 2 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||