| ID | hsa_circ_0000378 | |||||
| Alias | hsa_circ_000007 | |||||
| Position | chr12:12397195-12397589 | |||||
| Strand | - | |||||
| Genomic length | 394 | |||||
| Spliced sequence length | 394 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_002336 | |||||
| Gene symbol | LRP6 | |||||
| Experimental exidence | ||||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 161 | 74 | 0 | 1 | Hs68_control | 9 | 9 | 20 | 17 |
| Maass2017 | vena_cava | 5 | 5 | 2 | 3 | |
| Rybak2015 | temporal_lobe | 110 | 53 | 32 | 67 | cerebellum | 38 | 34 | 77 | 108 | diencephalon | 49 | 41 | 60 | 79 | frontal_cortex | 268 | 117 | 79 | 108 | occipital_lobe | 178 | 97 | 73 | 97 | SY5Y_exp2_D4 | 5 | 4 | 18 | 30 | Sy5y_exp1_D2 | 6 | 5 | 16 | 19 | parietal_lobe | 60 | 46 | 64 | 104 |
| Salzman2013 | Bj | 13 | 9 | 47 | 8 | Huvec | 17 | 9 | 34 | 9 | K562 | 31 | 29 | 27 | 48 | Nhek | 15 | 7 | 12 | 10 | Ag04450 | 18 | 13 | 43 | 23 |
| Memczak2013 | cd_19 | 1 | 1 | 2 | 0 | HEK293 | 1 | 1 | 1 | 0 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||