| ID | hsa_circ_0000374 | |||||
| Alias | hsa_circ_000562 | |||||
| Position | chr12:2929251-2930958 | |||||
| Strand | + | |||||
| Genomic length | 1707 | |||||
| Spliced sequence length | 542 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_018463 | |||||
| Gene symbol | ITFG2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Hsmm | 27 | 3 | 7 | 12 | Hepg2 | 11 | 5 | 31 | 17 | A549 | 8 | 5 | 30 | 45 | Bj | 24 | 5 | 18 | 18 | Ag04450 | 13 | 5 | 22 | 27 | H1hesc | 9 | 3 | 33 | 14 | Gm12878 | 5 | 3 | 24 | 29 | K562 | 3 | 3 | 38 | 24 | Nhek | 16 | 3 | 9 | 7 | Helas3 | 23 | 9 | 26 | 44 | Sknshra |
| Memczak2013 | cd_19 | 2 | 2 | 8 | 12 | |
| Rybak2015 | cerebellum | 10 | 9 | 17 | 22 | parietal_lobe | 11 | 8 | 21 | 36 | frontal_cortex | 97 | 51 | 16 | 13 | occipital_lobe | 35 | 21 | 13 | 15 | temporal_lobe | 13 | 9 | 14 | 14 | SY5Y_exp2_D0 | 2 | 2 | 7 | 5 | diencephalon | 18 | 14 | 4 | 17 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||