| ID | hsa_circ_0000339 | |||||
| Alias | hsa_circ_002025 | |||||
| Position | chr11:73418464-73429763 | |||||
| Strand | - | |||||
| Genomic length | 11299 | |||||
| Spliced sequence length | 312 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_198896 | |||||
| Gene symbol | RAB6A | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | ada_scid | 2 | 2 | 0 | 2 | neutophils | 3 | 3 | 0 | 0 | WAS2 | 6 | 6 | 0 | 0 | platelets | 8 | 6 | 3 | 9 |
| Salzman2013 | K562 | 72 | 39 | 148 | 0 | Bj | 5 | 4 | 23 | 0 | Helas3 | 40 | 12 | 42 | 0 | Nhek | 22 | 4 | 81 | 6 | Ag04450 | 12 | 9 | 36 | 0 | A549 | 1 | 1 | 41 | 0 | Sknshra | 23 | 9 | 37 | 0 | Gm12878 | 28 | 11 | 60 | 1 | H1hesc | 1 | 1 | 51 | 0 |
| Memczak2013 | cd_19 | 7 | 3 | 2 | 0 | cd_34 | 17 | 3 | 0 | 0 |
| Rybak2015 | temporal_lobe | 323 | 91 | 56 | 43 | Sy5y_exp1_D0 | 4 | 4 | 8 | 0 | cerebellum | 148 | 99 | 86 | 39 | frontal_cortex | 895 | 201 | 136 | 71 | Sy5y_exp1_D2 | 8 | 8 | 6 | 10 | parietal_lobe | 231 | 111 | 76 | 3 | occipital_lobe | 414 | 152 | 118 | 39 | Sy5y_exp1_D4 | 2 | 2 | 9 | 10 | diencephalon | 181 | 123 | 124 | 103 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||