ID hsa_circ_0000284
Aliashsa_circ_000016
Position chr11:33307958-33309057
Strand +
Genomic length 1099
Spliced sequence length 1099
Annotation
  • ANNOTATED
  • CDS
  • coding
  • INTERNAL
  • OVCODE
  • OVEXON
  • UTR5
Repeats None
Best transcript NM_005734
Gene symbol HIPK3
Experimental exidence
Scores circRNA study Sample total reads
circular junction		 unique reads
circular junction		 unique reads
linear-5' junctions		 unique reads
linear-3' junctions
Jeck2013Hs68_control 404 103 23 35
Hs68_RNase 3296 411 1 19
Memczak2013HEK293 3 3 0 2
cd_19 27 16 5 9
cd_34 21 1 4 0
neutr 1 1 2 7
Rybak2015SY5Y_exp2_D4 22 17 7 7
temporal_lobe 1382 271 53 34
SY5Y_exp2_D8 18 11 6 6
Sy5y_exp1_D0 69 41 5 13
cerebellum 812 281 98 64
frontal_cortex 5246 662 101 77
parietal_lobe 1369 292 98 71
Sy5y_exp1_D2 51 33 7 10
Sy5y_exp1_D4 41 32 12 10
diencephalon 1198 344 98 98
occipital_lobe 3655 589 84 80
SY5Y_exp2_D0 26 13 10 9
Salzman2013Huvec 160 37 29 41
Helas3 515 123 40 46
Nhlf 71 8 2 15
K562 230 146 15 50
A549 481 125 44 56
Hsmm 96 22 10 23
Ag04450 823 169 42 46
Gm12878 229 103 27 53
Nhek 389 104 48 96
Hepg2 416 99 32 41
Mcf7 44 9 4 21
Sknshra 436 103 28 65
Bj 765 149 39 50
H1hesc 208 77 15 32
Maass2017adipose 25 18 10 5
umbilical_cord 2 2 2 2
cortex 6 5 2 2
LCL 14 12 7 7
placenta 2 2 2 4
HUAEC 16 10 3 6
VSMC 17 13 0 3
MSC_047 22 15 0 2
decidua 10 9 4 9
MSC 5 5 2 3
EPC 12 10 2 2
WAS2 23 17 10 8
right_atrium 17 13 12 12
fibroblasts 14 10 2 4
platelets 113 37 4 5
osteocytes 6 5 0 4
ada_scid 8 7 7 5
neutophils 4 4 10 15
muscle 9 8 9 9
chondrocytes 14 12 0 0
vena_cava 27 19 9 13
Aligned readsMemczak 2013 circRNA study (pooled samples)
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