| ID | hsa_circ_0000274 | |||||
| Alias | hsa_circ_000793 | |||||
| Position | chr11:3752620-3774638 | |||||
| Strand | - | |||||
| Genomic length | 22018 | |||||
| Spliced sequence length | 556 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_005387 | |||||
| Gene symbol | NUP98 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 105 | 61 | 16 | 22 | Hs68_control | 8 | 8 | 97 | 51 |
| Memczak2013 | cd_19 | 2 | 1 | 13 | 6 | HEK293 | 1 | 1 | 4 | 0 |
| Rybak2015 | frontal_cortex | 33 | 23 | 76 | 45 | temporal_lobe | 19 | 9 | 34 | 35 | occipital_lobe | 40 | 22 | 86 | 53 | cerebellum | 16 | 12 | 86 | 63 | diencephalon | 17 | 16 | 44 | 38 | parietal_lobe | 22 | 19 | 70 | 50 |
| Salzman2013 | Gm12878 | 3 | 2 | 110 | 59 | K562 | 17 | 16 | 252 | 193 | Helas3 | 9 | 5 | 118 | 38 | A549 | 13 | 6 | 110 | 54 | Sknshra | 2 | 2 | 41 | 28 | Ag04450 | 13 | 7 | 82 | 54 | Nhek | 3 | 2 | 116 | 41 | Bj | 1 | 1 | 55 | 35 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||