| ID | hsa_circ_0000267 | |||||
| Alias | hsa_circ_000105 | |||||
| Position | chr10:126370175-126370948 | |||||
| Strand | - | |||||
| Genomic length | 773 | |||||
| Spliced sequence length | 773 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_014661 | |||||
| Gene symbol | FAM53B | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | A549 | 26 | 14 | 27 | 7 | Hepg2 | 26 | 15 | 15 | 28 | Hmec | Ag04450 | 37 | 21 | 28 | 14 | Mcf7 | 86 | 19 | 79 | 6 | Huvec | 33 | 11 | 27 | 12 | Gm12878 | 62 | 40 | 89 | 14 | Sknshra | 73 | 29 | 24 | 17 | K562 | 85 | 63 | 63 | 6 | Helas3 | 32 | 20 | 28 | 26 | Hsmm | 63 | 7 | 20 | 11 | Nhek | 42 | 20 | 74 | 30 | Bj | 42 | 14 | 8 | 5 | H1hesc | 73 | 35 | 88 | 17 |
| Jeck2013 | Hs68_RNase | 180 | 82 | 30 | 9 | Hs68_control | 10 | 10 | 12 | 4 |
| Maass2017 | adipose | 3 | 3 | 5 | 2 | ada_scid | 3 | 3 | 2 | 2 | platelets | 2 | 2 | 0 | 0 | WAS2 | 2 | 2 | 6 | 4 |
| Memczak2013 | cd_19 | 3 | 2 | 11 | 14 | |
| Rybak2015 | temporal_lobe | 156 | 59 | 49 | 26 | diencephalon | 232 | 122 | 89 | 36 | occipital_lobe | 304 | 118 | 130 | 37 | frontal_cortex | 477 | 147 | 121 | 37 | cerebellum | 173 | 101 | 109 | 47 | Sy5y_exp1_D4 | 2 | 2 | 5 | 8 | SY5Y_exp2_D4 | 3 | 3 | 13 | 7 | parietal_lobe | 160 | 94 | 98 | 46 | Sy5y_exp1_D0 | 8 | 7 | 15 | 9 | Sy5y_exp1_D2 | 4 | 4 | 16 | 5 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||