| ID | hsa_circ_0000260 | |||||
| Alias | hsa_circ_002043 | |||||
| Position | chr10:112356155-112358048 | |||||
| Strand | + | |||||
| Genomic length | 1893 | |||||
| Spliced sequence length | 305 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_005445 | |||||
| Gene symbol | SMC3 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | HEK293 | 1 | 1 | 11 | 8 | cd_19 | 24 | 5 | 1 | 4 |
| Maass2017 | WAS2 | 4 | 4 | 16 | 10 | MSC_047 | 2 | 2 | 5 | 8 | platelets | 12 | 11 | 3 | 0 |
| Jeck2013 | Hs68_RNase | 286 | 114 | 7 | 0 | Hs68_control | 10 | 10 | 26 | 22 |
| Rybak2015 | occipital_lobe | 370 | 143 | 114 | 86 | Sy5y_exp1_D4 | 6 | 6 | 22 | 28 | SY5Y_exp2_D8 | 2 | 2 | 14 | 13 | temporal_lobe | 440 | 137 | 74 | 51 | SY5Y_exp2_D0 | 4 | 4 | 23 | 24 | frontal_cortex | 577 | 170 | 100 | 84 | parietal_lobe | 196 | 113 | 105 | 82 | SY5Y_exp2_D4 | 4 | 4 | 12 | 17 | Sy5y_exp1_D0 | 6 | 6 | 34 | 39 | diencephalon | 106 | 69 | 99 | 80 | Sy5y_exp1_D2 | 9 | 7 | 32 | 28 | cerebellum | 128 | 96 | 118 | 80 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||