| ID | hsa_circ_0000235 | |||||
| Alias | hsa_circ_001010 | |||||
| Position | chr10:35805450-35819171 | |||||
| Strand | + | |||||
| Genomic length | 13721 | |||||
| Spliced sequence length | 315 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_145012 | |||||
| Gene symbol | CCNY | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | frontal_cortex | 220 | 88 | 54 | 131 | diencephalon | 113 | 78 | 57 | 141 | cerebellum | 59 | 42 | 49 | 109 | occipital_lobe | 139 | 80 | 45 | 131 | parietal_lobe | 68 | 52 | 43 | 101 | temporal_lobe | 86 | 43 | 28 | 83 |
| Memczak2013 | cd_19 | 4 | 2 | 0 | 11 | |
| Salzman2013 | Helas3 | 13 | 5 | 14 | 75 | Gm12878 | 9 | 5 | 42 | 80 | Nhek | 31 | 7 | 23 | 99 | A549 | 12 | 7 | 16 | 71 | Bj | K562 | 27 | 23 | 105 | 246 | Ag04450 | 26 | 12 | 32 | 109 | Hepg2 | 29 | 9 | 16 | 75 | H1hesc | 3 | 2 | 33 | 75 |
| Maass2017 | neutophils | 2 | 2 | 5 | 9 | platelets | 7 | 4 | 7 | 11 |
| Jeck2013 | Hs68_RNase | 71 | 46 | 23 | 103 | Hs68_control | 2 | 2 | 48 | 104 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples)![]() | |||||
