| ID | hsa_circ_0000231 | |||||
| Alias | hsa_circ_000783 | |||||
| Position | chr10:32197099-32199491 | |||||
| Strand | - | |||||
| Genomic length | 2392 | |||||
| Spliced sequence length | 794 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_018287 | |||||
| Gene symbol | ARHGAP12 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 394 | 75 | 0 | 14 | Hs68_control | 25 | 17 | 6 | 53 |
| Memczak2013 | HEK293 | 1 | 1 | 0 | 1 | neutr | 2 | 1 | 0 | 3 |
| Maass2017 | MSC | 2 | 2 | 0 | 3 | vena_cava | 2 | 2 | 0 | 6 |
| Rybak2015 | Sy5y_exp1_D2 | 11 | 8 | 6 | 26 | parietal_lobe | 98 | 52 | 11 | 119 | Sy5y_exp1_D0 | 10 | 8 | 2 | 13 | Sy5y_exp1_D4 | 4 | 4 | 3 | 16 | SY5Y_exp2_D0 | 3 | 3 | 2 | 19 | occipital_lobe | 257 | 68 | 14 | 121 | diencephalon | 144 | 60 | 8 | 133 | SY5Y_exp2_D4 | 6 | 5 | 4 | 25 | temporal_lobe | 143 | 37 | 15 | 46 | frontal_cortex | 236 | 60 | 8 | 96 | cerebellum | 118 | 60 | 16 | 148 |
| Salzman2013 | Helas3 | 10 | 10 | 1 | 22 | K562 | 104 | 77 | 7 | 68 | Hsmm | 8 | 2 | 0 | 4 | Bj | 11 | 9 | 6 | 35 | Hepg2 | 16 | 11 | 5 | 15 | Nhlf | 16 | 2 | 0 | 3 | H1hesc | 35 | 16 | 3 | 75 | Gm12878 | 21 | 15 | 1 | 44 | Sknshra | 32 | 17 | 8 | 47 | Hmec | Nhek | 33 | 11 | 1 | 48 | A549 | 44 | 29 | 13 | 78 | Ag04450 | 59 | 34 | 7 | 60 | Mcf7 | 22 | 6 | 0 | 5 | Huvec |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||