| ID | hsa_circ_0000228 | |||||
| Alias | hsa_circ_002044 | |||||
| Position | chr10:31661946-31676195 | |||||
| Strand | + | |||||
| Genomic length | 14249 | |||||
| Spliced sequence length | 14249 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_030751 | |||||
| Gene symbol | ZEB1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | chondrocytes | 2 | 2 | 0 | 0 | neutophils | 4 | 4 | 0 | 2 | WAS2 | 5 | 5 | 2 | 9 | HUAEC | 2 | 2 | 0 | 2 | platelets | 2 | 2 | 0 | 0 |
| Salzman2013 | Hepg2 | 7 | 5 | 0 | 6 | Hsmm | 12 | 5 | 1 | 0 | Ag04450 | 99 | 51 | 33 | 72 | K562 | 31 | 23 | 8 | 15 | Bj | 51 | 26 | 11 | 5 | Helas3 | 10 | 7 | 1 | 0 | Nhlf | 7 | 1 | 0 | 0 | A549 | 14 | 10 | 4 | 3 | Huvec | 30 | 15 | 4 | 13 | Gm12878 | 82 | 45 | 25 | 23 | Sknshra | 18 | 13 | 2 | 5 |
| Jeck2013 | Hs68_control | 25 | 18 | 10 | 48 | Hs68_RNase | 444 | 152 | 94 | 217 |
| Memczak2013 | neutr | 2 | 2 | 2 | 3 | cd_19 | 23 | 13 | 6 | 5 |
| Rybak2015 | diencephalon | 39 | 33 | 28 | 139 | cerebellum | 108 | 71 | 59 | 205 | Sy5y_exp1_D2 | 3 | 3 | 0 | 3 | frontal_cortex | 56 | 20 | 18 | 105 | parietal_lobe | 26 | 14 | 20 | 81 | temporal_lobe | 20 | 8 | 9 | 44 | occipital_lobe | 96 | 31 | 29 | 122 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||