| ID | hsa_circ_0000220 | |||||
| Alias | hsa_circ_001836 | |||||
| Position | chr10:15863654-15889942 | |||||
| Strand | - | |||||
| Genomic length | 26288 | |||||
| Spliced sequence length | 707 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_024948 | |||||
| Gene symbol | FAM188A | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | cd_34 | 15 | 3 | 0 | 0 | |
| Rybak2015 | occipital_lobe | 64 | 34 | 99 | 119 | diencephalon | 50 | 33 | 108 | 114 | temporal_lobe | 46 | 20 | 51 | 75 | frontal_cortex | 186 | 60 | 101 | 141 | cerebellum | 21 | 19 | 62 | 108 | parietal_lobe | 40 | 32 | 70 | 88 |
| Salzman2013 | Bj | 1 | 1 | 23 | 16 | Helas3 | 1 | 1 | 9 | 3 | Sknshra | 1 | 1 | 39 | 17 | Nhek | 3 | 2 | 31 | 21 | Gm12878 | 2 | 2 | 20 | 21 | Ag04450 | 6 | 4 | 29 | 23 | A549 | 2 | 2 | 17 | 13 |
| Maass2017 | cortex | 3 | 3 | 3 | 2 | WAS2 | 2 | 2 | 5 | 3 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||