| ID | hsa_circ_0000211 | |||||
| Alias | hsa_circ_000524 | |||||
| Position | chr10:7318853-7327916 | |||||
| Strand | - | |||||
| Genomic length | 9063 | |||||
| Spliced sequence length | 434 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001018039 | |||||
| Gene symbol | SFMBT2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | HEK293 | 2 | 2 | 1 | 8 | |
| Maass2017 | decidua | 10 | 8 | 3 | 8 | platelets | 3 | 3 | 0 | 0 | ada_scid | 10 | 9 | 3 | 0 | cortex | 15 | 11 | 0 | 5 | LCL | 11 | 9 | 3 | 7 | muscle | 4 | 4 | 0 | 0 | WAS2 | 28 | 20 | 4 | 8 | adipose | 4 | 4 | 2 | 2 | umbilical_cord | 2 | 2 | 0 | 0 | right_atrium | 9 | 6 | 5 | 2 | vena_cava | 21 | 12 | 0 | 0 |
| Rybak2015 | frontal_cortex | 744 | 176 | 36 | 116 | SY5Y_exp2_D0 | 9 | 9 | 5 | 7 | temporal_lobe | 178 | 71 | 32 | 40 | diencephalon | 866 | 285 | 78 | 198 | Sy5y_exp1_D2 | 15 | 15 | 6 | 8 | Sy5y_exp1_D4 | 9 | 6 | 4 | 7 | parietal_lobe | 347 | 135 | 41 | 52 | occipital_lobe | 650 | 196 | 30 | 80 | Sy5y_exp1_D0 | 24 | 17 | 4 | 11 | SY5Y_exp2_D4 | 6 | 6 | 4 | 5 | cerebellum | 935 | 319 | 104 | 228 |
| Salzman2013 | A549 | 36 | 23 | 38 | 25 | Hepg2 | 34 | 15 | 45 | 13 | Gm12878 | 368 | 153 | 79 | 95 | Sknshra | 34 | 19 | 31 | 16 | Nhek | 10 | 3 | 5 | 4 | Ag04450 | 9 | 7 | 6 | 9 | H1hesc | 72 | 29 | 23 | 30 | Huvec | 1 | 1 | 0 | 0 | Helas3 | 29 | 15 | 52 | 11 | K562 | 390 | 217 | 38 | 85 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||