| ID | hsa_circ_0000196 | |||||
| Alias | hsa_circ_000565 | |||||
| Position | chr1:231506307-231509845 | |||||
| Strand | - | |||||
| Genomic length | 3538 | |||||
| Spliced sequence length | 257 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_022051 | |||||
| Gene symbol | EGLN1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | cerebellum | 60 | 48 | 126 | 87 | occipital_lobe | 202 | 99 | 125 | 67 | frontal_cortex | 285 | 117 | 127 | 102 | diencephalon | 94 | 69 | 138 | 80 | parietal_lobe | 88 | 57 | 112 | 78 | temporal_lobe | 60 | 34 | 91 | 37 |
| Jeck2013 | Hs68_control | Hs68_RNase | 56 | 36 | 1 | 0 |
| Salzman2013 | Gm12878 | 24 | 14 | 93 | 25 | Sknshra | 5 | 3 | 81 | 19 | Nhlf | Ag04450 | 7 | 5 | 79 | 10 | Bj | 4 | 3 | 53 | 7 | Huvec | H1hesc | A549 | 12 | 6 | 121 | 28 | K562 | 33 | 26 | 189 | 127 | Helas3 | 11 | 6 | 93 | 31 |
| Memczak2013 | HEK293 | 2 | 2 | 3 | 1 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||