circBase

ID	hsa_circ_0000195
Alias	hsa_circ_000564
Position	chr1:231090078-231097049
Strand	-
Genomic length	6971
Spliced sequence length	242
Annotation	ANNOTATED CDS coding INTERNAL OVCODE OVEXON
Repeats	None
Best transcript	NM_024525
Gene symbol	TTC13
Scores	circRNA study	Sample	total reads circular junction	unique reads circular junction	unique reads linear-5' junctions	unique reads linear-3' junctions
	Salzman2013	Hepg2	47	11	40	27
		K562	37	23	16	108
		Nhek	11	4	13	23
		Helas3	56	23	21	30
		H1hesc	34	11	18	34
		Mcf7
		Gm12878	79	32	9	52
		Sknshra	33	16	19	35
		A549	81	40	39	49
		Ag04450	9	7	14	32
	Memczak2013	HEK293	2	2	0	1
	Jeck2013	Hs68_RNase	69	45	0	36
	Jeck2013	Hs68_control	4	4	15	22
	Rybak2015	SY5Y_exp2_D4	3	3	7	4
		frontal_cortex	562	126	54	155
		Sy5y_exp1_D2	5	5	6	8
		Sy5y_exp1_D0	9	7	10	15
		parietal_lobe	158	85	39	95
		SY5Y_exp2_D0	3	3	4	8
		occipital_lobe	330	128	44	96
		temporal_lobe	122	53	25	71
		diencephalon	89	63	64	103
		cerebellum	122	84	42	71
	Maass2017	vena_cava	3	3	2	2
	Maass2017	platelets	12	10	0	2
Aligned reads	Memczak 2013 circRNA study (pooled samples)