| ID | hsa_circ_0000160 | |||||
| Alias | hsa_circ_001903 | |||||
| Position | chr1:172520651-172526934 | |||||
| Strand | + | |||||
| Genomic length | 6283 | |||||
| Spliced sequence length | 670 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_014283 | |||||
| Gene symbol | C1orf9 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_control | 9 | 6 | 43 | 50 | Hs68_RNase | 65 | 31 | 0 | 16 |
| Salzman2013 | Gm12878 | 5 | 3 | 23 | 6 | Sknshra | K562 | 9 | 7 | 35 | 42 | Bj | 1 | 1 | 26 | 2 | H1hesc | Mcf7 |
| Rybak2015 | temporal_lobe | 32 | 20 | 28 | 82 | diencephalon | 64 | 48 | 74 | 111 | occipital_lobe | 157 | 74 | 61 | 154 | SY5Y_exp2_D4 | 2 | 2 | 11 | 22 | frontal_cortex | 110 | 62 | 56 | 115 | Sy5y_exp1_D0 | 3 | 3 | 10 | 27 | parietal_lobe | 43 | 32 | 72 | 80 | Sy5y_exp1_D4 | 5 | 5 | 15 | 20 | cerebellum | 52 | 41 | 64 | 105 | Sy5y_exp1_D2 | 4 | 2 | 12 | 23 |
| Memczak2013 | neutr | 9 | 4 | 5 | 6 | cd_19 | 8 | 2 | 23 | 7 |
| Maass2017 | neutophils | 3 | 2 | 0 | 3 | platelets | 17 | 11 | 0 | 11 | osteocytes | 2 | 2 | 0 | 0 | adipose | 4 | 4 | 0 | 2 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||