| ID | hsa_circ_0000117 | |||||
| Alias | hsa_circ_001812 | |||||
| Position | chr1:117944807-117957453 | |||||
| Strand | + | |||||
| Genomic length | 12646 | |||||
| Spliced sequence length | 472 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_006699 | |||||
| Gene symbol | MAN1A2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | HEK293 | 1 | 1 | 2 | 7 | cd_19 | 13 | 6 | 3 | 22 |
| Rybak2015 | frontal_cortex | 671 | 191 | 103 | 597 | parietal_lobe | 199 | 104 | 83 | 346 | Sy5y_exp1_D0 | 31 | 27 | 13 | 63 | SY5Y_exp2_D4 | 9 | 8 | 16 | 48 | cerebellum | 207 | 125 | 85 | 404 | temporal_lobe | 546 | 122 | 74 | 351 | SY5Y_exp2_D0 | 15 | 14 | 20 | 49 | Sy5y_exp1_D4 | 17 | 11 | 17 | 60 | diencephalon | 295 | 145 | 98 | 444 | SY5Y_exp2_D8 | 7 | 7 | 11 | 30 | Sy5y_exp1_D2 | 24 | 19 | 21 | 49 | occipital_lobe | 478 | 154 | 97 | 552 |
| Jeck2013 | Hs68_RNase | 146 | 65 | 4 | 66 | Hs68_control | 44 | 26 | 76 | 128 |
| Maass2017 | muscle | 2 | 2 | 4 | 6 | vena_cava | 4 | 2 | 3 | 15 | decidua | 3 | 3 | 9 | 17 | MSC_047 | 2 | 2 | 3 | 14 | EPC | 2 | 2 | 0 | 5 | WAS2 | 8 | 6 | 5 | 28 | neutophils | 4 | 4 | 0 | 14 | ada_scid | 3 | 3 | 0 | 21 | placenta | 3 | 3 | 24 | 30 | chondrocytes | 4 | 4 | 0 | 14 | cortex | 6 | 6 | 5 | 31 | right_atrium | 4 | 4 | 5 | 8 | platelets | 33 | 22 | 3 | 32 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||