| ID | hsa_circ_0000095 | |||||
| Alias | hsa_circ_001732 | |||||
| Position | chr1:95609446-95616975 | |||||
| Strand | + | |||||
| Genomic length | 7529 | |||||
| Spliced sequence length | 410 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001199691 | |||||
| Gene symbol | TMEM56-RWDD3 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | vena_cava | 9 | 7 | 2 | 12 | decidua | 3 | 3 | 0 | 0 | right_atrium | 3 | 3 | 2 | 7 | platelets | 20 | 15 | 0 | 11 |
| Memczak2013 | cd_19 | 2 | 1 | 0 | 3 | neutr | 9 | 3 | 0 | 6 |
| Rybak2015 | parietal_lobe | 103 | 64 | 18 | 50 | occipital_lobe | 207 | 110 | 10 | 58 | temporal_lobe | 167 | 66 | 10 | 56 | Sy5y_exp1_D2 | 6 | 6 | 0 | 4 | diencephalon | 161 | 88 | 59 | 73 | cerebellum | 296 | 146 | 44 | 97 | Sy5y_exp1_D4 | 4 | 3 | 0 | 5 | frontal_cortex | 345 | 126 | 29 | 92 |
| Salzman2013 | Sknshra | A549 | 27 | 16 | 12 | 34 | K562 | 85 | 59 | 18 | 131 | Helas3 | 5 | 3 | 4 | 14 | H1hesc | 6 | 4 | 0 | 16 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||