circBase

ID	hsa_circ_0000061
Alias	hsa_circ_002155
Position	chr1:41536266-41541123
Strand	-
Genomic length	4857
Spliced sequence length	360
Annotation	ANNOTATED CDS coding INTERNAL OVCODE OVEXON
Repeats	None
Best transcript	NM_001172220
Gene symbol	SCMH1
Scores	circRNA study	Sample	total reads circular junction	unique reads circular junction	unique reads linear-5' junctions	unique reads linear-3' junctions
	Rybak2015	SY5Y_exp2_D0	3	3	13	11
		SY5Y_exp2_D4	2	2	15	12
		cerebellum	68	53	31	29
		Sy5y_exp1_D4	6	6	15	20
		temporal_lobe	106	50	24	8
		frontal_cortex	213	93	33	25
		Sy5y_exp1_D0	7	6	19	26
		parietal_lobe	140	85	41	33
		occipital_lobe	162	85	26	18
		SY5Y_exp2_D8	2	2	13	10
		diencephalon	103	70	51	35
		Sy5y_exp1_D2	6	6	19	21
	Salzman2013	Gm12878	123	76	22	37
		Mcf7	19	5	9	16
		Sknshra	56	28	38	34
		Nhek	32	15	15	8
		Bj	112	47	40	30
		A549	79	43	43	36
		Helas3	86	51	49	26
		H1hesc	27	16	20	29
		Huvec	10	7	33	23
		K562	47	37	28	27
		Hepg2	87	40	39	29
		Ag04450	105	64	58	38
	Jeck2013	Hs68_control	21	19	46	39
	Jeck2013	Hs68_RNase	555	171	34	28
	Maass2017	adipose	6	5	5	8
		vena_cava	5	5	3	2
		right_atrium	3	3	5	5
		EPC	2	2	4	3
		WAS2	7	6	3	5
		platelets	5	4	0	0
		muscle	3	3	0	0
	Memczak2013	cd_34	29	8	6	0
		HEK293	1	1	8	3
		cd_19	32	11	4	4
Aligned reads	Memczak 2013 circRNA study (pooled samples)