circBase

ID	hsa_circ_0000061
Alias	hsa_circ_002155
Position	chr1:41536266-41541123
Strand	-
Genomic length	4857
Spliced sequence length	360
Annotation	ANNOTATED CDS coding INTERNAL OVCODE OVEXON
Repeats	None
Best transcript	NM_001172220
Gene symbol	SCMH1
Scores	circRNA study	Sample	total reads circular junction	unique reads circular junction	unique reads linear-5' junctions	unique reads linear-3' junctions
	Maass2017	WAS2	7	6	3	5
		adipose	6	5	5	8
		EPC	2	2	4	3
		muscle	3	3	0	0
		vena_cava	5	5	3	2
		right_atrium	3	3	5	5
		platelets	5	4	0	0
	Rybak2015	SY5Y_exp2_D0	3	3	13	11
		occipital_lobe	162	85	26	18
		Sy5y_exp1_D0	7	6	19	26
		frontal_cortex	213	93	33	25
		SY5Y_exp2_D4	2	2	15	12
		temporal_lobe	106	50	24	8
		parietal_lobe	140	85	41	33
		Sy5y_exp1_D2	6	6	19	21
		SY5Y_exp2_D8	2	2	13	10
		Sy5y_exp1_D4	6	6	15	20
		cerebellum	68	53	31	29
		diencephalon	103	70	51	35
	Salzman2013	Nhek	32	15	15	8
		Mcf7	19	5	9	16
		Ag04450	105	64	58	38
		Sknshra	56	28	38	34
		A549	79	43	43	36
		Huvec	10	7	33	23
		Hepg2	87	40	39	29
		Bj	112	47	40	30
		Helas3	86	51	49	26
		K562	47	37	28	27
		H1hesc	27	16	20	29
		Gm12878	123	76	22	37
	Jeck2013	Hs68_RNase	555	171	34	28
	Jeck2013	Hs68_control	21	19	46	39
	Memczak2013	cd_19	32	11	4	4
		HEK293	1	1	8	3
		cd_34	29	8	6	0
Aligned reads	Memczak 2013 circRNA study (pooled samples)