| ID | hsa_circ_0000042 | |||||
| Alias | hsa_circ_000827 | |||||
| Position | chr1:29362337-29365938 | |||||
| Strand | + | |||||
| Genomic length | 3601 | |||||
| Spliced sequence length | 271 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001166007 | |||||
| Gene symbol | EPB41 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | cd_19 | 3 | 2 | 14 | 15 | |
| Salzman2013 | Ag04450 | 2 | 2 | 8 | 13 | Huvec | 5 | 2 | 31 | 48 | Mcf7 | 1 | 1 | 3 | 15 | Bj | 5 | 3 | 4 | 11 | K562 | 71 | 54 | 225 | 306 | Nhek | 6 | 5 | 17 | 36 | Gm12878 | 24 | 13 | 58 | 114 | Sknshra | 6 | 4 | 18 | 48 | H1hesc | 19 | 12 | 88 | 143 | Hepg2 | 3 | 2 | 16 | 94 | Helas3 |
| Rybak2015 | parietal_lobe | 72 | 43 | 76 | 78 | Sy5y_exp1_D2 | 2 | 2 | 34 | 28 | diencephalon | 56 | 42 | 79 | 79 | cerebellum | 83 | 63 | 102 | 121 | frontal_cortex | 263 | 58 | 65 | 85 | temporal_lobe | 161 | 30 | 45 | 61 | occipital_lobe | 95 | 34 | 67 | 72 |
| Maass2017 | neutophils | 2 | 2 | 17 | 8 | platelets | 9 | 8 | 44 | 47 | WAS2 | 2 | 2 | 8 | 5 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples)![]() | |||||
