| ID | hsa_circ_0000033 | |||||
| Alias | hsa_circ_001236 | |||||
| Position | chr1:26584087-26586293 | |||||
| Strand | + | |||||
| Genomic length | 2206 | |||||
| Spliced sequence length | 438 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_022778 | |||||
| Gene symbol | CEP85 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Sknshra | 3 | 3 | 21 | 0 | K562 | 72 | 49 | 171 | 87 | Ag04450 | 5 | 3 | 6 | 2 | Nhek | 3 | 2 | 28 | 0 | H1hesc | 7 | 2 | 81 | 7 | Helas3 | 1 | 1 | 41 | 0 | A549 | 3 | 1 | 29 | 0 | Gm12878 | 18 | 11 | 34 | 1 |
| Memczak2013 | cd_19 | 5 | 2 | 7 | 0 | |
| Maass2017 | WAS2 | 2 | 2 | 6 | 6 | vena_cava | 2 | 2 | 0 | 2 | platelets | 3 | 2 | 0 | 0 |
| Rybak2015 | parietal_lobe | 30 | 23 | 18 | 25 | Sy5y_exp1_D2 | 2 | 2 | 16 | 19 | cerebellum | 37 | 29 | 32 | 19 | diencephalon | 39 | 28 | 28 | 34 | temporal_lobe | 19 | 9 | 12 | 32 | frontal_cortex | 105 | 45 | 21 | 12 | occipital_lobe | 28 | 17 | 15 | 12 |
| Jeck2013 | Hs68_control | 8 | 6 | 24 | 24 | Hs68_RNase | 93 | 55 | 19 | 25 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||