| ID | hsa_circ_0000025 | |||||
| Alias | hsa_circ_000558 | |||||
| Position | chr1:21295966-21307720 | |||||
| Strand | - | |||||
| Genomic length | 11754 | |||||
| Spliced sequence length | 516 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001198802 | |||||
| Gene symbol | EIF4G3 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | HEK293 | 2 | 2 | 6 | 3 | |
| Rybak2015 | temporal_lobe | 7 | 3 | 5 | 14 | frontal_cortex | 15 | 7 | 2 | 29 | cerebellum | 9 | 8 | 29 | 38 | Sy5y_exp1_D2 | 4 | 4 | 23 | 20 | parietal_lobe | 5 | 5 | 31 | 38 | occipital_lobe | 9 | 7 | 13 | 24 | diencephalon | 9 | 9 | 27 | 49 |
| Jeck2013 | Hs68_RNase | 37 | 27 | 24 | 16 | Hs68_control | 11 | 7 | 60 | 52 |
| Salzman2013 | Sknshra | 44 | 20 | 133 | 73 | Bj | 48 | 16 | 70 | 48 | K562 | 9 | 7 | 108 | 62 | H1hesc | 39 | 22 | 170 | 103 | Helas3 | 42 | 21 | 154 | 90 | Ag04450 | 43 | 25 | 148 | 76 |
| Maass2017 | platelets | 7 | 7 | 15 | 8 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||