| ID | hsa_circ_0000018 | |||||
| Alias | hsa_circ_000541 | |||||
| Position | chr1:15860731-15863309 | |||||
| Strand | + | |||||
| Genomic length | 2578 | |||||
| Spliced sequence length | 407 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_015291 | |||||
| Gene symbol | DNAJC16 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | temporal_lobe | 52 | 30 | 34 | 34 | cerebellum | 21 | 18 | 31 | 30 | diencephalon | 32 | 26 | 51 | 45 | occipital_lobe | 79 | 40 | 31 | 33 | Sy5y_exp1_D4 | 2 | 2 | 14 | 9 | parietal_lobe | 35 | 28 | 40 | 43 | frontal_cortex | 104 | 56 | 51 | 60 |
| Maass2017 | platelets | 14 | 10 | 3 | 5 | |
| Salzman2013 | H1hesc | 3 | 2 | 5 | 21 | Hepg2 | 1 | 1 | 2 | 15 | K562 | 17 | 16 | 55 | 68 | Gm12878 | 4 | 4 | 2 | 15 | Huvec | Sknshra | 4 | 3 | 10 | 40 | Ag04450 | 1 | 1 | 7 | 34 | Nhek | 5 | 2 | 3 | 12 |
| Jeck2013 | Hs68_RNase | 49 | 33 | 7 | 17 | Hs68_control | 1 | 1 | 16 | 13 |
| Memczak2013 | cd_19 | 1 | 1 | 4 | 3 | HEK293 | 1 | 1 | 2 | 1 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||