| ID | hsa_circ_0000007 | |||||
| Alias | hsa_circ_001873 | |||||
| Position | chr1:1735857-1737977 | |||||
| Strand | - | |||||
| Genomic length | 2120 | |||||
| Spliced sequence length | 227 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_002074 | |||||
| Gene symbol | GNB1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | occipital_lobe | 4 | 3 | 90 | 113 | diencephalon | 7 | 6 | 215 | 184 | Sy5y_exp1_D0 | 2 | 2 | 95 | 97 | cerebellum | 11 | 8 | 117 | 134 | frontal_cortex | 70 | 32 | 136 | 113 | parietal_lobe | 28 | 19 | 105 | 128 | Sy5y_exp1_D4 | 2 | 2 | 76 | 57 | temporal_lobe | 7 | 3 | 74 | 137 |
| Jeck2013 | Hs68_control | 3 | 3 | 139 | 163 | Hs68_RNase | 198 | 89 | 141 | 76 |
| Maass2017 | platelets | 5 | 4 | 14 | 9 | decidua | 2 | 2 | 10 | 11 |
| Salzman2013 | H1hesc | 78 | 32 | 401 | 1065 | A549 | 183 | 59 | 269 | 267 | Sknshra | 185 | 70 | 352 | 427 | Hsmm | 28 | 6 | 287 | 410 | Helas3 | 121 | 56 | 410 | 456 | Hepg2 | 190 | 41 | 408 | 463 | Nhlf | Bj | 143 | 61 | 286 | 365 | Nhek | 73 | 20 | 522 | 891 | Gm12878 | 121 | 52 | 296 | 774 | Ag04450 | 187 | 78 | 329 | 388 | Mcf7 | 51 | 9 | 204 | 527 | Hmec | Huvec | 99 | 25 | 340 | 526 | K562 | 56 | 41 | 399 | 627 |
| Memczak2013 | cd_19 | 16 | 5 | 41 | 37 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||