# chrom start end strand circRNA ID genomic length spliced seq length total reads (circular junction) unique reads (circular junction) unique reads (linear-5' junctions) unique reads (linear-3' junctions) samples repeats annotation best transcript gene symbol circRNA study chr17 84785850 84797667 - mmu_circ_0000825 11817 11817 7 5 72 97 mm_ES, mm_head, mm_brain2, P19_exp1_D2, P19_exp1_D0, P19_exp2_D0 None INTERGENIC None None Memczak2013, Rybak2015 chr17 63820756 63840236 - mmu_circ_0000802 19480 513 3 2 14 12 mm_ES, mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_015794 Fbxl17 Memczak2013, Rybak2015 chr2 129636223 129636973 + mmu_circ_0001066 750 750 3 2 16 19 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 NM_183262 Stk35 Memczak2013, Rybak2015 chr18 10815272 10815382 - mmu_circ_0007126 110 110 2 2 0 0 P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000052838 Mib1 Rybak2015 chr16 94605518 94624975 + mmu_circ_0000714 19457 19457 2 2 22 16 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None INTERGENIC None None Memczak2013, Rybak2015 chr1 93012218 93012344 + mmu_circ_0009069 126 126 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000097649 Lrrfip1 Rybak2015 chr11 6211011 6217083 + mmu_circ_0000230 6072 3074 2 2 38 0 mm_head, mm_brain1, mm_brain2, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, forebrain, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, P19_exp2_D0 None ALT_ACCEPTOR, CDS, coding, INTERNAL, intronic, OVCODE, OVEXON NM_001252287 Ogdh Memczak2013, Rybak2015 chr17 50745619 50750520 + mmu_circ_0000798 4901 2691 2 2 8 6 mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_013880 Plcl2 Memczak2013, Rybak2015 chr13 69651767 69654781 - mmu_circ_0000477 3014 292 2 2 17 2 mm_ES, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_198600 Papd7 Memczak2013, Rybak2015 chr5 107047089 107095864 - mmu_circ_0001380 48775 4061 2 2 0 11 mm_head, mm_brain1, PN_D28, forebrain, midbrain, hippocampus, cerebellum, P19_exp2_D0 None ALT_DONOR, CDS, coding, INTERNAL, UTR3, UTR5 NM_026856 Zfp644 Memczak2013, Rybak2015 chr10 39978311 39978476 - mmu_circ_0002193 165 165 4 4 0 0 P19_exp1_D2, P19_exp1_D0, P19_exp2_D0 NA ANTISENSE, INTERNAL, ncRNA, OVEXON ENSMUST00000083936 U3 Rybak2015 chr13 28736828 28736938 - mmu_circ_0004553 110 110 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, INTERNAL, intronic, ncRNA ENSMUST00000148885 2610307P16Rik Rybak2015 chr5 31508520 31508661 + mmu_circ_0012532 141 141 4 4 0 0 P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0, sy_cyto NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000031032 Ppm1g Rybak2015 chr4 108151477 108152346 + mmu_circ_0001239 869 869 6 6 17 4 mm_head, P19_exp2_D12, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_175472 Zcchc11 Memczak2013, Rybak2015 chr11 21458464 21459275 - mmu_circ_0002878 811 171 2 2 72 0 P19_exp2_D4, PN_D14, P19_exp2_D0 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000102874 Mdh1 Rybak2015 chr5 90758356 90758520 - mmu_circ_0012858 164 164 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000014421 Ankrd17 Rybak2015 chr12 86369719 86374984 + mmu_circ_0000402 5265 2236 2 2 23 9 mm_ES, mm_brain1, P19_exp2_D12, sy_cell, olfactory_bulb, frontal_cortex, P19_exp1_D12, P19_exp1_D4, forebrain, hippocampus, hindbrain, cerebellum, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_178363 Ylpm1 Memczak2013, Rybak2015 chr2 91664616 91665509 + mmu_circ_0010258 893 182 2 2 26 20 P19_exp2_D4, frontal_cortex, forebrain, hindbrain, PN_D14, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000045705 Ambra1 Rybak2015 chr7 140139726 140142118 + mmu_circ_0001636 2392 2392 4 3 14 0 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ALT_ACCEPTOR, CDS, coding, OVCODE, OVEXON, upstream_start NM_207302 Zranb1 Memczak2013, Rybak2015 chr1 36127434 36127573 - mmu_circ_0008683 139 139 2 2 0 0 P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, intronic ENSMUST00000088174 Hs6st1 Rybak2015 chr13 58279211 58284685 - mmu_circ_0004691 5474 687 3 3 0 22 P19_exp1_D0, P19_exp2_D0 NA ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000058735 Ubqln1 Rybak2015 chr4 134482426 134482552 + mmu_circ_0011299 126 126 5 4 0 0 P19_exp2_D12, P19_exp1_D2, P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, INTERNAL, ncRNA, OVEXON ENSMUST00000148900 D4Wsu53e Rybak2015 chr5 73902124 73913983 + mmu_circ_0012770 11859 448 2 2 10 14 PN_D21, PN_D28, forebrain, hippocampus, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000133137 Dcun1d4 Rybak2015 chr9 50352561 50358846 - mmu_circ_0015648 6285 634 2 2 0 0 P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000119103 Bco2 Rybak2015 chr3 68840234 68840349 + mmu_circ_0010769 115 115 2 2 0 0 P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000107802 Trim59 Rybak2015 chr11 100983986 101018234 + mmu_circ_0002636 34248 31717 35 18 0 15 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ALT_DONOR, CDS, coding, downstream_end, OVCODE, OVEXON, UTR3 ENSMUST00000043680 Tubg1 Rybak2015 chr3 51111971 51129957 - mmu_circ_0001125 17986 484 2 2 10 5 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ALT_ACCEPTOR, CDS, coding, upstream_start, UTR5 NM_023502 Elf2 Memczak2013, Rybak2015 chr13 17842090 17864791 - mmu_circ_0000433 22701 1386 2 2 18 17 mm_head, mm_brain1, P19_exp2_D12, P19_exp2_D4, P19_exp1_D0, forebrain, hippocampus, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001081058 Cdk13 Memczak2013, Rybak2015 chr2 153177924 153182914 + mmu_circ_0001090 4990 195 2 2 21 15 mm_ES, mm_head, mm_brain2, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, forebrain, PN_D07, hippocampus, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001039939 Asxl1 Memczak2013, Rybak2015 chr6 144981302 144988155 - mmu_circ_0013174 6853 432 2 2 55 38 PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, hippocampus, sy_snpt, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000032402 Bcat1 Rybak2015 chr5 118542504 118545738 - mmu_circ_0001395 3234 404 2 2 19 31 mm_ES, mm_head, mm_brain1, forebrain, midbrain, hippocampus, sy_snpt, hindbrain, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_172721 Fbxw8 Memczak2013, Rybak2015 chr3 41385116 41400748 + mmu_circ_0010668 15632 725 2 2 18 10 P19_exp2_D4, P19_exp1_D4, forebrain, midbrain, PN_D07, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000163764 Phf17 Rybak2015 chr11 100987345 101022502 + mmu_circ_0000322 35157 35157 22 16 0 0 mm_head, P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, midbrain, P19_exp2_D0 None ALT_DONOR, CDS, coding, downstream_end, OVCODE, OVEXON, UTR3 NM_134024 Tubg1 Memczak2013, Rybak2015 chr2 104310905 104312004 - mmu_circ_0001052 1099 1099 2 2 4 4 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_010434 Hipk3 Memczak2013, Rybak2015 chr5 107566548 107578977 - mmu_circ_0011964 12429 1130 2 2 17 26 P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000031224 Tgfbr3 Rybak2015 chr3 88805694 88811799 + mmu_circ_0001148 6105 838 2 2 75 24 mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hippocampus, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_138679 Ash1l Memczak2013, Rybak2015 chr4 8678470 8712910 + mmu_circ_0011822 34440 2247 2 2 36 19 P19_exp2_D12, P19_exp2_D4, P19_exp1_D4, hippocampus, cerebellum, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000051558 Chd7 Rybak2015 chr5 33162514 33178337 - mmu_circ_0001333 15823 5072 4 3 3 18 mm_ES, mm_head, P19_exp2_D12, sy_cell, P19_exp2_D4, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_194340 C330019G07Rik Memczak2013, Rybak2015 chr3 88970956 88974331 + mmu_circ_0010895 3375 1708 2 2 18 15 P19_exp2_D0 NA ANNOTATED, INTERNAL, ncRNA, OVCODE, OVEXON ENSMUST00000138822 Clk2 Rybak2015 chr19 60842380 60842533 + mmu_circ_0007996 153 153 3 3 0 0 P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000025955 Eif3a Rybak2015 chr19 4342846 4394892 - mmu_circ_0007804 52046 1538 2 2 27 18 olfactory_bulb, P19_exp2_D4, P19_exp1_D0, forebrain, midbrain, cerebellum, PN_D14, P19_exp2_D0, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000075856 Kdm2a Rybak2015 chr6 128382577 128383216 - mmu_circ_0013102 639 195 3 3 0 0 P19_exp1_D2, midbrain, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000139448 Fkbp4 Rybak2015 chr4 100590646 100625855 + mmu_circ_0010976 35209 596 2 2 51 52 P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000030257 Cachd1 Rybak2015 chr15 82681942 82687714 - mmu_circ_0000629 5772 5772 9 8 33 8 mm_ES, mm_head, mm_brain2, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_013836 Tcf20 Memczak2013, Rybak2015 chr13 28975183 28977159 - mmu_circ_0004558 1976 410 4 4 4 44 P19_exp2_D4, P19_exp2_D0 NA ALT_ACCEPTOR, INTERNAL, ncRNA, OVEXON ENSMUST00000148885 2610307P16Rik Rybak2015 chr2 68145097 68152660 - mmu_circ_0001026 7563 284 2 2 8 23 mm_head, mm_brain1, olfactory_bulb, frontal_cortex, forebrain, PN_D14, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_016866 Stk39 Memczak2013, Rybak2015 chr8 79974591 79974822 - mmu_circ_0001693 231 158 3 3 11 12 mm_ES, mm_head, mm_brain2, P19_exp1_D0, forebrain, cerebellum, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_030113 Arhgap10 Memczak2013, Rybak2015 chr3 53320083 53320209 - mmu_circ_0010685 126 126 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000091137 Frem2 Rybak2015 chr5 81941008 81941809 + mmu_circ_0012808 801 801 2 2 12 10 forebrain, midbrain, PN_D07, hindbrain, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000132375 Lphn3 Rybak2015 chr5 119043341 119043579 + mmu_circ_0001396 238 238 4 4 19 7 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_172424 Med13l Memczak2013, Rybak2015 chr17 13115507 13116180 + mmu_circ_0006546 673 188 2 2 0 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, forebrain, hippocampus, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, INTERNAL, ncRNA, OVCODE, OVEXON ENSMUST00000129632 Tcp1 Rybak2015 chr5 72637330 72637437 + mmu_circ_0012760 107 107 2 2 0 50 P19_exp2_D0 NA ALT_DONOR, INTERNAL, ncRNA, OVEXON ENSMUST00000126664 Atp10d Rybak2015 chr4 89119321 89130031 + mmu_circ_0011849 10710 338 6 4 2 0 P19_exp2_D4, P19_exp1_D2, P19_exp1_D0, P19_exp2_D0 NA ALT_DONOR, INTERNAL, ncRNA, OVEXON ENSMUST00000139272 Gm12610 Rybak2015 chr12 52873260 52873692 - mmu_circ_0000376 432 344 2 2 47 57 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, frontal_cortex, forebrain, midbrain, PN_D07, hippocampus, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL NM_144788 Hectd1 Memczak2013, Rybak2015 chr19 9080869 9081070 + mmu_circ_0008035 201 201 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000092956 Ahnak Rybak2015 chr2 70606918 70625052 - mmu_circ_0001031 18134 1333 2 2 10 40 mm_ES, mm_head, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ALT_DONOR, CDS, coding, INTERNAL, intronic, OVCODE, OVEXON NM_172664 Tlk1 Memczak2013, Rybak2015 chr5 103930385 103930931 + mmu_circ_0001372 546 546 3 3 31 35 mm_head, P19_exp2_D4, P19_exp1_D4, forebrain, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL NM_011204 Ptpn13 Memczak2013, Rybak2015 chr19 60618912 60640197 - mmu_circ_0000969 21285 21285 2 2 32 28 mm_head, PN_D21, P19_exp2_D4, P19_exp1_D12, forebrain, PN_D07, hippocampus, PN_D14, PN_D01, P19_exp2_D0 None INTERGENIC None None Memczak2013, Rybak2015 chr11 83318356 83318554 + mmu_circ_0003457 198 198 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000021018 Taf15 Rybak2015 chr10 59475209 59527156 + mmu_circ_0002313 51947 745 7 7 17 10 P19_exp2_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000164083 Ascc1 Rybak2015 chr5 34185760 34188916 + mmu_circ_0001335 3156 789 6 6 48 18 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, OVCODE, OVEXON, UTR5 NM_001081102 Whsc1 Memczak2013, Rybak2015 chr2 139834434 139883235 - mmu_circ_0001076 48801 471 2 2 22 10 mm_brain1, mm_brain2, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001159641 Tasp1 Memczak2013, Rybak2015 chr16 33421406 33435060 + mmu_circ_0000684 13654 567 2 2 13 12 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_011749 Zfp148 Memczak2013, Rybak2015 chr1 180253264 180255444 - mmu_circ_0000117 2180 2180 2 2 0 6 mm_ES, mm_head, mm_brain1, mm_brain2, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None INTERGENIC None None Memczak2013, Rybak2015 chr3 132983899 132993476 + mmu_circ_0001171 9577 284 2 2 19 14 mm_ES, mm_head, mm_brain1, forebrain, cerebellum, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL NM_146141 Ppa2 Memczak2013, Rybak2015 chr11 120440543 120440680 + mmu_circ_0002837 137 137 2 2 0 0 P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000067936 Arhgdia Rybak2015 chr13 35907777 35908444 + mmu_circ_0000451 667 667 2 2 10 36 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_009881 Cdyl Memczak2013, Rybak2015 chr17 26403227 26404303 + mmu_circ_0000734 1076 255 2 2 30 40 mm_ES, mm_head, PN_D21, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, forebrain, midbrain, sy_snpt, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL NM_025881 Luc7l Memczak2013, Rybak2015 chr9 70406843 70410668 + mmu_circ_0001803 3825 311 2 2 8 23 mm_ES, mm_head, mm_brain1, PN_D21, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, forebrain, hippocampus, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_025690 Sltm Memczak2013, Rybak2015 chr7 119902897 119903153 + mmu_circ_0001612 256 256 2 2 34 27 mm_ES, mm_head, PN_D21, P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hindbrain, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_001166584 Tead1 Memczak2013, Rybak2015 chr3 88811063 88847565 + mmu_circ_0010879 36502 1594 25 17 62 16 P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000090933 Ash1l Rybak2015 chr2 161283289 161283393 + mmu_circ_0009541 104 104 2 2 0 0 P19_exp2_D0 NA INTERGENIC None None Rybak2015 chrX 103536991 103627885 - mmu_circ_0016075 90894 80184 5 5 0 0 P19_exp2_D0 NA ALT_DONOR, CDS, coding, downstream_end, OVCODE, OVEXON, UTR3 ENSMUST00000039447 Fndc3c1 Rybak2015 chr8 59043354 59048207 + mmu_circ_0014868 4853 464 2 2 14 7 P19_exp1_D12, midbrain, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000040218 Fbxo8 Rybak2015 chr12 45488466 45489042 + mmu_circ_0003990 576 576 2 2 18 0 P19_exp2_D0 NA ALT_ACCEPTOR, coding, INTERNAL, intronic, OVEXON, UTR5 ENSMUST00000110751 Nrcam Rybak2015 chr16 4179423 4180133 - mmu_circ_0006288 710 710 25 17 43 27 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, cerebellum, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000023165 Crebbp Rybak2015 chr8 47294625 47294751 + mmu_circ_0014843 126 126 5 4 0 0 P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, PN_D07, hippocampus, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000034049 Slc25a4 Rybak2015 chr2 156077511 156080046 + mmu_circ_0009491 2535 257 2 2 22 0 PN_D21, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000037401 Phf20 Rybak2015 chr3 87718471 87718612 + mmu_circ_0010843 141 141 2 2 55 0 P19_exp2_D0 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000005017 Hdgf Rybak2015 chr1 120316016 120316495 + mmu_circ_0000066 479 479 2 2 25 19 mm_head, mm_brain2, P19_exp2_D12, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, hindbrain, cerebellum, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_029709 Clasp1 Memczak2013, Rybak2015 chr11 96124125 96126159 + mmu_circ_0003575 2034 2034 17 13 0 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, downstream_end, OVCODE, OVEXON, UTR3 ENSMUST00000150490 Gm53 Rybak2015 chr15 12802795 12803128 - mmu_circ_0005540 333 333 3 3 0 0 P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, intronic ENSMUST00000169061 Drosha Rybak2015 chr2 25821182 25822468 - mmu_circ_0009762 1286 425 5 5 0 8 P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000061377 Camsap1 Rybak2015 chrX 141905978 141906083 - mmu_circ_0016143 105 105 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000112836 Amot Rybak2015 chr13 28760238 28761863 - mmu_circ_0000448 1625 548 5 5 40 66 mm_head, P19_exp2_D12, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hindbrain, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, INTERNAL, ncRNA, OVEXON NR_045054 2610307P16Rik Memczak2013, Rybak2015 chr9 96492368 96511918 - mmu_circ_0001829 19550 394 3 3 12 6 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_053268 Rasa2 Memczak2013, Rybak2015 chr10 12850899 12851359 - mmu_circ_0002082 460 460 9 5 0 0 P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000121646 Plagl1 Rybak2015 chr14 51427174 51427325 - mmu_circ_0000534 151 151 5 4 0 0 mm_ES, mm_head, P19_exp2_D12, PN_D21, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, PN_D07, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ALT_ACCEPTOR, ALT_DONOR, INTERNAL, ncRNA NR_002142 Rpph1 Memczak2013, Rybak2015 chr9 120860795 120860905 + mmu_circ_0015384 110 110 2 2 76 0 P19_exp2_D4, cerebellum, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000170729 Ctnnb1 Rybak2015 chr16 4137365 4180133 - mmu_circ_0006285 42768 1242 5 5 39 27 P19_exp2_D12, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000023165 Crebbp Rybak2015 chr8 74891802 74904205 - mmu_circ_0001688 12403 819 2 2 38 32 mm_ES, mm_brain1, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL NM_007944 Eps15l1 Memczak2013, Rybak2015 chr11 70688247 70700673 + mmu_circ_0000282 12426 494 2 2 35 20 mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_019400 Rabep1 Memczak2013, Rybak2015 chr1 137202271 137202402 - mmu_circ_0008197 131 131 4 4 0 0 PN_D28, P19_exp2_D4, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000081104 Timm17a Rybak2015 chr4 132590177 132590996 - mmu_circ_0001280 819 819 2 2 0 0 mm_head, P19_exp2_D12, P19_exp1_D12, P19_exp2_D0 None ANTISENSE, coding, INTERNAL, intronic NM_146155 Ahdc1 Memczak2013, Rybak2015 chr10 20044959 20045066 + mmu_circ_0002111 107 107 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000043881 Bclaf1 Rybak2015 chr1 153323269 153325755 - mmu_circ_0000087 2486 466 2 2 29 16 mm_ES, mm_head, PN_D21, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, PN_D07, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_011277 Rnf2 Memczak2013, Rybak2015 chr6 134012081 134016483 + mmu_circ_0001528 4402 4402 3 3 17 0 mm_ES, P19_exp2_D12, PN_D21, PN_D28, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, PN_D07, sy_snpt, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic NM_007961 Etv6 Memczak2013, Rybak2015 chr1 30860792 30860935 - mmu_circ_0008639 143 143 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000088310 Phf3 Rybak2015 chr11 6213790 6217083 + mmu_circ_0000231 3293 295 6 6 38 41 mm_ES, mm_head, P19_exp2_D12, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001252287 Ogdh Memczak2013, Rybak2015 chr17 23952894 23953059 + mmu_circ_0006579 165 165 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000088621 Srrm2 Rybak2015 chr17 65941630 65944394 - mmu_circ_0000805 2764 338 5 5 57 32 mm_ES, mm_head, mm_brain1, mm_brain2, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_013933 Vapa Memczak2013, Rybak2015 chr13 100793673 100795417 + mmu_circ_0004381 1744 1744 2 2 0 0 P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000038104 Bdp1 Rybak2015 chr18 74129544 74130930 - mmu_circ_0000895 1386 1386 3 3 7 5 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_172632 Mapk4 Memczak2013, Rybak2015 chr5 58308900 58309023 - mmu_circ_0012712 123 123 2 2 0 0 P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, intronic ENSMUST00000094783 Pcdh7 Rybak2015 chr14 14782645 14783777 - mmu_circ_0000502 1132 195 3 3 23 27 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, olfactory_bulb, P19_exp2_D4, frontal_cortex, forebrain, midbrain, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL NM_025435 Thoc7 Memczak2013, Rybak2015 chr5 124189510 124189617 - mmu_circ_0012114 107 107 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000111515 Rsrc2 Rybak2015 chr19 61259547 61260051 - mmu_circ_0008001 504 504 5 2 0 0 forebrain, P19_exp2_D0 NA ANTISENSE, CDS, coding, downstream_end, OVCODE, OVEXON, upstream_start ENSMUST00000092094 Gm6020 Rybak2015 chr5 65957227 65972707 + mmu_circ_0012726 15480 236 5 4 59 42 P19_exp2_D4, P19_exp1_D0, forebrain, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000142407 Ube2k Rybak2015 chr9 59732286 59758514 + mmu_circ_0015754 26228 1692 2 2 13 11 P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000136740 Myo9a Rybak2015 chr13 67737681 67824187 - mmu_circ_0004758 86506 74938 3 3 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, downstream_end, OVCODE, OVEXON, upstream_start, UTR3, UTR5 ENSMUST00000137496 Zfp738 Rybak2015 chr1 38110460 38142497 - mmu_circ_0000028 32037 2431 5 5 13 17 mm_ES, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON NM_019570 Rev1 Memczak2013, Rybak2015 chr13 81613930 81621070 - mmu_circ_0004822 7140 1034 10 8 14 25 P19_exp2_D12, P19_exp2_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000095585 Gpr98 Rybak2015 chr3 83736374 83736508 - mmu_circ_0010807 134 134 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000052342 D930015E06Rik Rybak2015 chr11 6093156 6093479 - mmu_circ_0000229 323 323 3 3 35 39 mm_head, PN_D21, P19_exp2_D4, forebrain, PN_D07, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_173748 Nudcd3 Memczak2013, Rybak2015 chr14 32629265 32630523 - mmu_circ_0005204 1258 1258 2 2 0 0 P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000014640 Ankrd28 Rybak2015 chrX 73031733 73031869 + mmu_circ_0016372 136 136 2 2 0 0 sy_cell, P19_exp1_D2, P19_exp1_D0, P19_exp2_D0, sy_cyto NA ANTISENSE, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000033547 Pls3 Rybak2015 chr10 12850203 12850319 - mmu_circ_0002078 116 116 3 3 0 0 P19_exp1_D2, P19_exp1_D4, hippocampus, P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000121646 Plagl1 Rybak2015 chr16 94484198 94490305 - mmu_circ_0000712 6107 6107 2 2 10 9 mm_head, mm_brain1, mm_brain2, frontal_cortex, P19_exp1_D2, midbrain, cerebellum, PN_D14, P19_exp2_D0 None INTERGENIC None None Memczak2013, Rybak2015 chr18 73816848 73818552 - mmu_circ_0007493 1704 288 3 3 14 45 P19_exp2_D4, P19_exp1_D12, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000025393 Smad4 Rybak2015 chr11 69548530 69548677 + mmu_circ_0003277 147 147 2 2 0 0 P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000058470 Polr2a Rybak2015 chr2 34203594 34203708 - mmu_circ_0009886 114 114 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000040638 Pbx3 Rybak2015 chr10 116792990 116805044 - mmu_circ_0000215 12054 1599 3 2 42 46 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 NM_001013391 Cpsf6 Memczak2013, Rybak2015 chr7 117190191 117191771 + mmu_circ_0013757 1580 456 2 2 51 39 P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000084731 Ipo7 Rybak2015 chr14 58352714 58353255 - mmu_circ_0005309 541 541 2 2 3 0 P19_exp1_D12, P19_exp1_D0, forebrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000022531 Lats2 Rybak2015 chr14 28251784 28263235 + mmu_circ_0005147 11451 1037 2 2 13 5 P19_exp2_D12, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, forebrain, hippocampus, cerebellum, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000022450 D14Abb1e Rybak2015 chr17 56709966 56710072 - mmu_circ_0006874 106 106 3 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, INTERNAL, ncRNA, OVEXON ENSMUST00000134741 Safb2 Rybak2015 chr6 71813134 71818797 + mmu_circ_0013513 5663 369 2 2 43 43 P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000064062 Immt Rybak2015 chr9 57297923 57298087 - mmu_circ_0015715 164 164 2 2 0 0 midbrain, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000046587 Scamp5 Rybak2015 chr3 87427450 87427612 + mmu_circ_0010835 162 162 3 3 0 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D12, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000039476 Arhgef11 Rybak2015 chr5 111182822 111185785 - mmu_circ_0001387 2963 2963 2 2 6 16 mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ALT_DONOR, CDS, coding, INTERNAL, intronic, OVCODE, OVEXON, UTR5 NM_029337 Ep400 Memczak2013, Rybak2015 chr5 36913944 36914686 - mmu_circ_0012606 742 742 2 2 10 4 PN_D21, PN_D28, P19_exp1_D12, forebrain, midbrain, PN_D07, hindbrain, cerebellum, PN_D14, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000140607 Tbc1d14 Rybak2015 chr6 30808737 30813610 - mmu_circ_0013277 4873 414 2 2 16 20 PN_D28, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000048774 Copg2 Rybak2015 chr10 56109733 56109879 + mmu_circ_0002290 146 146 2 2 0 0 P19_exp2_D12, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000068581 Gja1 Rybak2015 chr2 34287522 34299926 + mmu_circ_0009889 12404 567 2 2 17 24 PN_D21, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D12, P19_exp1_D4, forebrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON, UTR5 ENSMUST00000147337 Mapkap1 Rybak2015 chr1 88253795 88253906 - mmu_circ_0009032 111 111 7 7 0 0 P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, PN_D07, hippocampus, PN_D01, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000027438 Ncl Rybak2015 chr1 121464372 121475654 - mmu_circ_0008099 11282 456 3 3 9 17 P19_exp2_D12, PN_D21, P19_exp2_D4, P19_exp1_D0, forebrain, PN_D07, hindbrain, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000163147 Epb4.1l5 Rybak2015 chr6 4708330 4708458 - mmu_circ_0013406 128 128 2 2 0 0 P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000166678 Peg10 Rybak2015 chr1 89260678 89276583 + mmu_circ_0000057 15905 494 5 5 18 37 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_146112 Gigyf2 Memczak2013, Rybak2015 chr12 52865007 52865141 - mmu_circ_0004036 134 134 2 2 51 41 PN_D14, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000042052 Hectd1 Rybak2015 chr19 44316149 44375934 + mmu_circ_0007815 59785 59785 165 55 73 0 forebrain, midbrain, PN_D14, P19_exp2_D0 NA ALT_DONOR, CDS, coding, downstream_end, OVCODE, OVERLAPTX, OVEXON, UTR3 ENSMUST00000026220 Scd3 Rybak2015 chr6 134491669 134492063 - mmu_circ_0013120 394 394 3 3 38 26 P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000032322 Lrp6 Rybak2015 chr4 57722322 57723015 + mmu_circ_0001212 693 693 3 3 4 0 mm_head, P19_exp2_D12, P19_exp1_D0, forebrain, hippocampus, P19_exp2_D0 None ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON NM_172868 Palm2 Memczak2013, Rybak2015 chr5 107047089 107048661 - mmu_circ_0001378 1572 461 3 3 0 23 mm_head, P19_exp2_D12, PN_D21, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ALT_DONOR, CDS, coding, INTERNAL, UTR3 NM_026856 Zfp644 Memczak2013, Rybak2015 chr1 157021115 157044565 + mmu_circ_0000091 23450 656 2 2 3 7 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_021433 Stx6 Memczak2013, Rybak2015 chr11 80063709 80064628 + mmu_circ_0000300 919 215 3 3 18 32 mm_head, PN_D21, olfactory_bulb, P19_exp2_D4, frontal_cortex, PN_D07, hippocampus, cerebellum, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001163354 Rhot1 Memczak2013, Rybak2015 chr12 13226166 13226355 + mmu_circ_0003808 189 189 4 4 0 0 P19_exp1_D0, P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000071103 Ddx1 Rybak2015 chr1 66334564 66335712 - mmu_circ_0008894 1148 1148 2 2 0 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, intronic ENSMUST00000114018 Mtap2 Rybak2015 chr5 104212142 104213532 + mmu_circ_0011938 1390 979 2 2 8 14 PN_D21, PN_D28, frontal_cortex, P19_exp1_D12, midbrain, cerebellum, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000054979 Aff1 Rybak2015 chr3 119450509 119464696 - mmu_circ_0010401 14187 669 2 2 40 6 P19_exp1_D12, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000029780 Ptbp2 Rybak2015 chr15 12802684 12803091 - mmu_circ_0005539 407 407 3 2 0 0 P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, intronic ENSMUST00000169061 Drosha Rybak2015 chr3 106334054 106342521 - mmu_circ_0001154 8467 704 2 2 20 10 mm_head, mm_brain1, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_133869 Cept1 Memczak2013, Rybak2015 chr4 48617452 48630203 + mmu_circ_0001204 12751 364 6 4 55 26 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_021436 Tmeff1 Memczak2013, Rybak2015 chr4 56919086 56925002 - mmu_circ_0001210 5916 273 3 2 36 30 mm_ES, mm_head, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, frontal_cortex, P19_exp1_D12, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_175518 D730040F13Rik Memczak2013, Rybak2015 chr17 23952801 23952990 + mmu_circ_0006576 189 189 2 2 0 0 P19_exp2_D12, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000088621 Srrm2 Rybak2015 chr2 128501406 128501983 - mmu_circ_0009324 577 367 2 2 61 33 olfactory_bulb, P19_exp1_D12, forebrain, midbrain, hindbrain, PN_D14, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000014499 Anapc1 Rybak2015 chr12 83373821 83373934 + mmu_circ_0004242 113 113 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000110321 Sipa1l1 Rybak2015 chr11 101115357 101115495 - mmu_circ_0002638 138 138 2 2 0 0 P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, intronic, OVCODE, OVEXON, UTR3 ENSMUST00000128260 Ramp2 Rybak2015 chr1 53313472 53338936 - mmu_circ_0000038 25464 602 4 4 10 8 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_153556 Pms1 Memczak2013, Rybak2015 chr1 95319843 95320437 + mmu_circ_0009095 594 594 2 2 0 0 P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000170883 Hdlbp Rybak2015 chr14 15540172 15566382 + mmu_circ_0005069 26210 11461 2 2 29 0 P19_exp2_D0 NA ALT_ACCEPTOR, coding, OVCODE, OVEXON, upstream_start, UTR5 ENSMUST00000074344 Slc4a7 Rybak2015 chr16 11230602 11239189 - mmu_circ_0006058 8587 814 2 2 44 9 P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000167571 Gspt1 Rybak2015 chr15 57856828 57860206 - mmu_circ_0005707 3378 171 2 2 22 0 P19_exp2_D0 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000100655 9130401M01Rik Rybak2015 chr5 145712398 145712558 - mmu_circ_0012318 160 160 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000110677 Smurf1 Rybak2015 chr11 29605534 29608770 + mmu_circ_0000250 3236 2418 8 6 30 6 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_194051 Rtn4 Memczak2013, Rybak2015 chr2 44965535 44968612 - mmu_circ_0009979 3077 412 3 3 39 8 P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON, UTR5 ENSMUST00000076836 Zeb2 Rybak2015 chr13 67707195 67735471 - mmu_circ_0004757 28276 26187 2 2 0 0 PN_D21, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, downstream_end, intronic, OVCODE, OVEXON, UTR3 ENSMUST00000012314 A530054K11Rik Rybak2015 chr14 35504867 35508291 + mmu_circ_0000522 3424 1172 2 2 42 56 mm_head, mm_brain1, P19_exp2_D12, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hippocampus, sy_snpt, cerebellum, PN_D14, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001004436 Wapal Memczak2013, Rybak2015 chr17 35150209 35150692 + mmu_circ_0006722 483 231 2 2 40 37 PN_D21, sy_cell, PN_D28, P19_exp2_D4, P19_exp1_D4, forebrain, midbrain, PN_D07, sy_snpt, hindbrain, PN_D14, PN_D01, P19_exp2_D0, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000087315 Vars Rybak2015 chr15 41629019 41657598 + mmu_circ_0005665 28579 1715 3 3 8 7 PN_D28, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, hippocampus, sy_snpt, cerebellum, P19_exp2_D0, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000110297 Oxr1 Rybak2015 chrY 466312 495077 - mmu_circ_0016439 28765 1904 2 2 18 19 forebrain, sy_snpt, PN_D14, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000069309 Uty Rybak2015 chr6 127418049 127428147 + mmu_circ_0013093 10098 651 3 3 17 17 P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000039680 Parp11 Rybak2015 chr4 35031018 35031638 - mmu_circ_0011582 620 620 4 4 9 11 P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000102975 Mobkl2b Rybak2015 chr3 119443232 119464696 - mmu_circ_0010399 21464 865 22 17 32 6 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000029780 Ptbp2 Rybak2015 chr7 89038684 89050522 - mmu_circ_0001589 11838 519 5 5 11 7 mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_013886 Hdgfrp3 Memczak2013, Rybak2015 chr2 165630686 165633429 - mmu_circ_0009570 2743 602 2 2 37 25 forebrain, midbrain, hindbrain, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000109269 Zmynd8 Rybak2015 chr14 64259880 64260014 + mmu_circ_0005344 134 134 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000119973 Xkr6 Rybak2015 chr12 13489191 13490850 + mmu_circ_0003822 1659 586 3 3 15 17 PN_D21, sy_cell, PN_D28, olfactory_bulb, frontal_cortex, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000042953 Nbas Rybak2015 chr1 155329871 155331002 - mmu_circ_0000090 1131 274 2 2 71 50 mm_head, PN_D21, forebrain, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_007842 Dhx9 Memczak2013, Rybak2015 chr12 52744090 52762700 - mmu_circ_0004030 18610 814 2 2 17 21 P19_exp2_D12, PN_D21, olfactory_bulb, P19_exp2_D4, forebrain, hippocampus, PN_D14, PN_D01, P19_exp2_D0, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000013130 Strn3 Rybak2015 chr18 74938075 74938238 - mmu_circ_0007503 163 163 5 5 0 0 PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, PN_D07, PN_D14, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, ncRNA, OVEXON, upstream_start ENSMUST00000158064 Scarna17 Rybak2015 chr11 108295439 108301910 + mmu_circ_0002745 6471 478 8 7 45 32 P19_exp2_D12, PN_D21, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, PN_D07, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000061287 Ccdc46 Rybak2015 chr7 13862330 13862450 - mmu_circ_0013948 120 120 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, INTERNAL, ncRNA, OVEXON ENSMUST00000140530 6330408A02Rik Rybak2015 chr6 88305476 88308636 - mmu_circ_0001491 3160 262 2 2 15 21 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_023060 Eefsec Memczak2013, Rybak2015 chr7 109171825 109171927 - mmu_circ_0001607 102 102 2 2 23 17 mm_ES, mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_029211 Rnf121 Memczak2013, Rybak2015 chr17 22851182 22851350 + mmu_circ_0006571 168 168 2 2 0 0 P19_exp2_D0 NA INTERGENIC None None Rybak2015 chr17 86497851 86520086 - mmu_circ_0000829 22235 22235 2 2 27 28 mm_head, mm_brain2, P19_exp2_D12, P19_exp2_D4, frontal_cortex, P19_exp1_D12, forebrain, midbrain, PN_D07, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None INTERGENIC None None Memczak2013, Rybak2015 chr13 42150768 42150911 + mmu_circ_0000455 143 143 2 2 9 10 mm_ES, mm_head, PN_D21, sy_cell, PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_007772 Hivep1 Memczak2013, Rybak2015 chr18 5748691 5761431 + mmu_circ_0007404 12740 471 2 2 7 4 midbrain, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000025081 Zeb1 Rybak2015 chr4 130283912 130286463 + mmu_circ_0011253 2551 438 5 5 16 30 PN_D21, P19_exp2_D4, P19_exp1_D12, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000030315 Pum1 Rybak2015 chr2 168530622 168536476 - mmu_circ_0009619 5854 368 2 2 17 23 P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000109175 Atp9a Rybak2015 chr9 96233248 96233399 - mmu_circ_0016011 151 151 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000034983 Atp1b3 Rybak2015 chr17 84785850 84815727 - mmu_circ_0000826 29877 29877 4 3 72 95 mm_ES, mm_head, P19_exp2_D4, P19_exp1_D2, P19_exp1_D0, P19_exp2_D0 None INTERGENIC None None Memczak2013, Rybak2015 chr18 31793443 31795753 + mmu_circ_0007220 2310 818 3 3 16 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp2_D0 NA ALT_ACCEPTOR, CDS, coding, OVCODE, OVEXON, upstream_start, UTR5 ENSMUST00000025109 Sap130 Rybak2015 chr2 119747101 119747578 + mmu_circ_0001060 477 237 3 3 29 30 mm_ES, mm_head, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, midbrain, PN_D07, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_013720 Mga Memczak2013, Rybak2015 chr11 43518035 43518979 + mmu_circ_0000254 944 944 5 3 18 14 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001164231 Pwwp2a Memczak2013, Rybak2015 chr4 144606637 144700944 - mmu_circ_0011392 94307 4678 4 4 55 48 P19_exp2_D4, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000036579 Vps13d Rybak2015 chr13 64344941 64349807 - mmu_circ_0000474 4866 355 11 11 54 4 mm_ES, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001122989 Cdc14b Memczak2013, Rybak2015 chr9 100605571 100612959 + mmu_circ_0001832 7388 205 2 2 41 34 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_009282 Stag1 Memczak2013, Rybak2015 chr19 57453038 57453665 + mmu_circ_0000964 627 491 2 2 9 22 mm_brain1, P19_exp2_D12, PN_D21, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, sy_snpt, hindbrain, cerebellum, PN_D14, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_145505 Fam160b1 Memczak2013, Rybak2015 chr11 50124336 50125222 - mmu_circ_0003089 886 150 2 2 0 0 P19_exp2_D12, PN_D21, P19_exp2_D4, PN_D14, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000020637 Canx Rybak2015 chr8 126819257 126829568 + mmu_circ_0001733 10311 248 3 3 20 18 mm_ES, mm_head, mm_brain1, PN_D21, sy_cell, PN_D28, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, forebrain, PN_D07, sy_snpt, cerebellum, PN_D14, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL NM_139272 Galnt2 Memczak2013, Rybak2015 chr19 57703574 57731728 + mmu_circ_0007921 28154 1239 2 2 25 22 P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000077282 Atrnl1 Rybak2015 chr15 12802832 12803128 - mmu_circ_0005541 296 296 2 2 0 0 P19_exp2_D4, P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, intronic ENSMUST00000169061 Drosha Rybak2015 chr9 72439557 72441167 + mmu_circ_0001804 1610 206 2 2 20 8 mm_ES, mm_head, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_001033536 Rfx7 Memczak2013, Rybak2015 chr12 53617065 53620954 + mmu_circ_0000377 3889 3889 6 5 37 21 mm_ES, mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, forebrain, hippocampus, hindbrain, cerebellum, PN_D01, P19_exp2_D0 None ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_009706 Arhgap5 Memczak2013, Rybak2015 chr12 60173024 60173219 - mmu_circ_0004104 195 195 2 2 0 0 P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000021381 Pnn Rybak2015 chr11 108295439 108333408 + mmu_circ_0002746 37969 647 3 3 16 32 P19_exp2_D12, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000061287 Ccdc46 Rybak2015 chr12 114059780 114059888 - mmu_circ_0003783 108 108 3 2 0 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000062092 Cdca4 Rybak2015 chr5 107063849 107095864 - mmu_circ_0001383 32015 3600 3 3 23 11 mm_ES, mm_head, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, forebrain, sy_snpt, hindbrain, cerebellum, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_026856 Zfp644 Memczak2013, Rybak2015 chr2 69386996 69390517 - mmu_circ_0010128 3521 348 2 2 52 33 P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000080953 Lrp2 Rybak2015 chr5 96557961 96563151 - mmu_circ_0012878 5190 395 2 2 18 2 PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000155901 Cnot6l Rybak2015 chr17 6137210 6139156 + mmu_circ_0000723 1946 1946 11 11 19 11 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ALT_ACCEPTOR, CDS, coding, OVCODE, OVEXON, upstream_start, UTR5 NM_054040 Tulp4 Memczak2013, Rybak2015 chr2 18043871 18047856 + mmu_circ_0009666 3985 294 4 4 24 27 PN_D28, P19_exp2_D4, P19_exp1_D2, P19_exp1_D0, hindbrain, cerebellum, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000114671 Mllt10 Rybak2015 chr18 32037677 32056690 + mmu_circ_0007226 19013 2563 2 2 17 26 P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000025264 Wdr33 Rybak2015 chr14 47635951 47636470 + mmu_circ_0000529 519 519 4 3 29 3 mm_head, mm_brain1, mm_brain2, PN_D21, sy_cell, PN_D28, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001037221 Samd4 Memczak2013, Rybak2015 chr7 107268797 107268921 - mmu_circ_0013707 124 124 5 4 0 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000032969 Pold3 Rybak2015 chr5 138566352 138566469 - mmu_circ_0012228 117 117 2 2 0 0 P19_exp1_D2, P19_exp1_D12, P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000110959 Zscan21 Rybak2015 chr15 98680776 98680911 + mmu_circ_0006029 135 135 2 2 0 0 P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000023741 Mll2 Rybak2015 chr8 49420942 49434767 - mmu_circ_0001677 13825 1110 2 2 38 47 mm_brain2, PN_D21, sy_cell, forebrain, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL NM_011857 Odz3 Memczak2013, Rybak2015 chr2 34631622 34631861 + mmu_circ_0009906 239 239 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000100171 Hspa5 Rybak2015 chrX 154407201 154407312 - mmu_circ_0016195 111 111 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000026750 Cnksr2 Rybak2015 chr8 114506281 114506383 - mmu_circ_0014596 102 102 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000034427 Adat1 Rybak2015 chr5 124826106 124864536 - mmu_circ_0012125 38430 4033 2 2 25 17 forebrain, midbrain, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000065263 Sbno1 Rybak2015 chr15 77093242 77093351 + mmu_circ_0005822 109 109 3 2 0 0 P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, intronic ENSMUST00000171751 Rbfox2 Rybak2015 chr9 72690501 72706756 + mmu_circ_0015874 16255 1644 2 2 48 60 P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000055535 Prtg Rybak2015 chr19 42637041 42638831 + mmu_circ_0000953 1790 1790 2 2 16 6 mm_ES, mm_head, mm_brain1, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, hippocampus, cerebellum, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_177464 D19Ertd386e Memczak2013, Rybak2015 chr10 62295641 62303126 - mmu_circ_0002343 7485 2388 3 3 29 13 PN_D21, PN_D28, P19_exp2_D4, frontal_cortex, forebrain, midbrain, PN_D07, sy_snpt, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000174189 Tet1 Rybak2015 chr9 64008627 64009248 - mmu_circ_0015779 621 227 2 2 22 27 P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000122091 Zwilch Rybak2015 chr1 54705720 54705823 - mmu_circ_0008790 103 103 4 3 0 0 P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000044359 Ankrd44 Rybak2015 chr2 139803342 139883235 - mmu_circ_0001073 79893 743 5 5 17 10 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001159641 Tasp1 Memczak2013, Rybak2015 chr5 108577929 108590777 + mmu_circ_0011972 12848 640 2 2 14 21 P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000047677 Ccdc18 Rybak2015 chr1 167534740 167538735 - mmu_circ_0000114 3995 514 2 2 36 13 mm_head, mm_brain1, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_001083897 Mpzl1 Memczak2013, Rybak2015 chr11 7030278 7039192 + mmu_circ_0003297 8914 585 7 7 36 17 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000020706 Adcy1 Rybak2015 chr10 45138942 45140514 - mmu_circ_0000165 1572 257 4 4 31 28 mm_ES, mm_head, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hippocampus, PN_D14, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL NM_001031772 Lin28b Memczak2013, Rybak2015 chr6 67222898 67227924 + mmu_circ_0013503 5026 204 2 2 0 0 P19_exp2_D4, P19_exp1_D12, PN_D07, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000042990 Serbp1 Rybak2015 chr14 55517068 55517199 - mmu_circ_0005282 131 131 2 2 0 0 P19_exp2_D0 NA INTERGENIC None None Rybak2015 chr14 55571082 55598399 - mmu_circ_0005286 27317 16499 2 2 0 0 P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, CDS, coding, OVCODE, OVERLAPTX, OVEXON, upstream_start, UTR5 ENSMUST00000145322 Myh6 Rybak2015 chr12 52748980 52762700 - mmu_circ_0000372 13720 703 4 4 40 21 mm_ES, mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_052973 Strn3 Memczak2013, Rybak2015 chr2 139867829 139883235 - mmu_circ_0001077 15406 350 2 2 8 10 mm_head, mm_brain1, mm_brain2, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hippocampus, sy_snpt, cerebellum, PN_D14, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001159641 Tasp1 Memczak2013, Rybak2015 chr5 107047089 107067654 - mmu_circ_0001379 20565 4000 6 5 0 21 mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, forebrain, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, P19_exp2_D0 None ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 NM_026856 Zfp644 Memczak2013, Rybak2015 chr12 52722766 52762700 - mmu_circ_0000371 39934 1744 2 2 37 21 mm_head, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_052973 Strn3 Memczak2013, Rybak2015 chr10 56108261 56108390 + mmu_circ_0002289 129 129 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000068581 Gja1 Rybak2015 chr16 4154856 4180133 - mmu_circ_0006286 25277 887 5 5 49 27 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, hindbrain, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000023165 Crebbp Rybak2015 chr9 114418797 114418999 - mmu_circ_0015350 202 202 2 2 0 0 P19_exp2_D0 NA INTERGENIC None None Rybak2015 chr13 28700386 28726275 - mmu_circ_0004551 25889 25889 2 2 20 0 P19_exp1_D4, forebrain, midbrain, PN_D01, P19_exp2_D0 NA ALT_ACCEPTOR, INTERNAL, intronic, ncRNA, OVEXON ENSMUST00000148885 2610307P16Rik Rybak2015 chr10 56109931 56110040 + mmu_circ_0002291 109 109 3 2 0 0 olfactory_bulb, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000068581 Gja1 Rybak2015 chr19 5799497 5799644 - mmu_circ_0007951 147 147 4 4 0 0 P19_exp2_D12, PN_D21, olfactory_bulb, P19_exp2_D4, frontal_cortex, hippocampus, cerebellum, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, INTERNAL, ncRNA, OVEXON ENSMUST00000172812 Malat1 Rybak2015 chr9 65642428 65643302 - mmu_circ_0001797 874 874 9 8 15 7 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_172536 Zfp609 Memczak2013, Rybak2015 chr2 55352381 55352541 - mmu_circ_0010025 160 160 2 2 0 0 P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, intronic ENSMUST00000067101 Kcnj3 Rybak2015 chr10 12902728 12910432 + mmu_circ_0002083 7704 7704 2 2 0 0 midbrain, P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000019950 Ltv1 Rybak2015 chr5 108509843 108517108 + mmu_circ_0011970 7265 631 4 3 39 45 PN_D21, P19_exp1_D2, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000143412 Mtf2 Rybak2015 chr11 49488631 49516156 - mmu_circ_0003069 27525 1739 3 3 0 7 P19_exp2_D4, P19_exp1_D0, PN_D07, P19_exp2_D0 NA ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON, UTR3, UTR5 ENSMUST00000145353 Cnot6 Rybak2015 chr9 88364561 88365179 - mmu_circ_0015979 618 618 2 2 0 0 PN_D01, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000069221 Syncrip Rybak2015 chr5 65957227 65985787 + mmu_circ_0001350 28560 465 10 10 50 42 mm_ES, mm_head, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_016786 Ube2k Memczak2013, Rybak2015 chr17 84776933 84777155 - mmu_circ_0007062 222 222 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000047524 Thada Rybak2015 chr16 4114861 4114963 - mmu_circ_0006279 102 102 2 2 0 56 P19_exp2_D0 NA ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000023165 Crebbp Rybak2015 chr5 3747020 3772787 - mmu_circ_0001311 25767 873 4 3 13 8 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001003909 Ankib1 Memczak2013, Rybak2015 chr14 47529785 47536726 + mmu_circ_0005248 6941 6941 4 4 3 0 P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000137543 Samd4 Rybak2015 chr11 93766472 93773772 + mmu_circ_0000313 7300 541 4 2 58 17 mm_brain1, mm_brain2, PN_D21, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D4, forebrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_134012 Mbtd1 Memczak2013, Rybak2015 chr12 52756388 52762700 - mmu_circ_0000373 6312 260 2 2 40 21 mm_ES, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_052973 Strn3 Memczak2013, Rybak2015 chr17 26262276 26262509 + mmu_circ_0006622 233 147 2 2 35 0 PN_D21, PN_D28, P19_exp2_D4, P19_exp1_D4, PN_D07, hippocampus, P19_exp2_D0 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000025014 Mrpl28 Rybak2015 chr9 106621938 106622055 - mmu_circ_0015218 117 117 2 2 24 29 P19_exp2_D12, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000046502 Rad54l2 Rybak2015 chr2 70608060 70625052 - mmu_circ_0001032 16992 191 4 4 42 40 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_172664 Tlk1 Memczak2013, Rybak2015 chr8 93456147 93457761 + mmu_circ_0001714 1614 1614 2 2 27 20 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_177224 Chd9 Memczak2013, Rybak2015 chr13 37923888 37923994 - mmu_circ_0004589 106 106 2 2 0 0 P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, intronic ENSMUST00000128570 Rreb1 Rybak2015 chr5 107063849 107067654 - mmu_circ_0001382 3805 3539 3 3 23 21 mm_ES, mm_head, mm_brain1, P19_exp2_D12, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hippocampus, hindbrain, cerebellum, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_026856 Zfp644 Memczak2013, Rybak2015 chr15 32199437 32201159 + mmu_circ_0005589 1722 1722 2 2 0 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D0, forebrain, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000067458 Sema5a Rybak2015 chr2 70624933 70625052 - mmu_circ_0010155 119 119 2 2 27 40 PN_D21, sy_cell, PN_D28, olfactory_bulb, frontal_cortex, forebrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, P19_exp2_D0, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000038584 Tlk1 Rybak2015 chr19 32234013 32234853 - mmu_circ_0007693 840 840 2 2 17 39 P19_exp1_D12, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000142618 Sgms1 Rybak2015 chr11 53079433 53079551 - mmu_circ_0003118 118 118 3 3 0 98 P19_exp2_D12, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, hippocampus, cerebellum, P19_exp2_D0, sy_cyto NA ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000020630 Hspa4 Rybak2015 chr9 79935236 79951571 + mmu_circ_0001819 16335 474 2 2 17 12 mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_146003 Senp6 Memczak2013, Rybak2015 chr15 82655660 82687714 - mmu_circ_0000628 32054 5866 9 7 0 8 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_013836 Tcf20 Memczak2013, Rybak2015 chr9 100734836 100749157 + mmu_circ_0015154 14321 303 2 2 21 25 P19_exp1_D12, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000129269 Stag1 Rybak2015 chr8 24301187 24302164 - mmu_circ_0014735 977 977 4 3 33 16 P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000167004 Agpat6 Rybak2015 chr13 91664189 91704299 + mmu_circ_0000489 40110 220 2 2 23 17 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_024272 Ssbp2 Memczak2013, Rybak2015 chr5 105248763 105327484 - mmu_circ_0011953 78721 78721 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, downstream_end, OVCODE, OVEXON, upstream_start ENSMUST00000165415 Gm3209 Rybak2015 chr8 113475279 113504993 - mmu_circ_0014567 29714 25700 34 26 0 20 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ALT_DONOR, CDS, coding, downstream_end, OVCODE, OVERLAPTX, OVEXON, UTR3 ENSMUST00000040416 Ddx19a Rybak2015 chr12 53617065 53643623 + mmu_circ_0004047 26558 4037 2 2 13 21 sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, forebrain, midbrain, hippocampus, sy_snpt, cerebellum, P19_exp2_D0 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000110725 Arhgap5 Rybak2015 chr5 102468868 102470762 - mmu_circ_0011931 1894 1894 2 2 0 10 PN_D28, P19_exp2_D4, P19_exp1_D2, P19_exp1_D0, forebrain, midbrain, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 NA ALT_DONOR, coding, INTERNAL, intronic, OVEXON, UTR5 ENSMUST00000053177 Wdfy3 Rybak2015 chr3 84707422 84708001 + mmu_circ_0010820 579 579 3 3 12 14 P19_exp2_D12, PN_D21, PN_D28, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, cerebellum, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON, UTR5 ENSMUST00000107679 Fbxw7 Rybak2015 chrX 140781224 140783962 + mmu_circ_0016141 2738 294 10 7 44 48 P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, PN_D07, sy_snpt, cerebellum, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000154827 Alg13 Rybak2015 chr10 59475209 59512619 + mmu_circ_0002312 37410 534 4 3 21 10 P19_exp2_D4, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000164083 Ascc1 Rybak2015 chr2 92050386 92070881 + mmu_circ_0010262 20495 4236 2 2 15 0 cerebellum, P19_exp2_D0 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, intronic, OVCODE, OVEXON, UTR5 ENSMUST00000162146 Phf21a Rybak2015 chr1 54708512 54712650 - mmu_circ_0008791 4138 404 2 2 76 0 P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000044359 Ankrd44 Rybak2015 chr8 87387956 87388451 + mmu_circ_0001705 495 338 2 2 33 50 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_025648 Farsa Memczak2013, Rybak2015 chr6 106727937 106728042 - mmu_circ_0012914 105 105 3 3 0 0 P19_exp2_D12, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D0, cerebellum, P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000057578 Trnt1 Rybak2015 chr17 45707671 45708053 - mmu_circ_0006777 382 164 4 2 0 0 PN_D28, P19_exp2_D4, P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000024739 Hsp90ab1 Rybak2015 chr7 82925031 82925169 + mmu_circ_0014398 138 138 2 2 0 0 P19_exp2_D0 NA INTERGENIC None None Rybak2015 chrX 91343621 91359602 - mmu_circ_0016408 15981 811 6 6 12 7 PN_D21, P19_exp2_D4, frontal_cortex, P19_exp1_D12, forebrain, PN_D07, cerebellum, PN_D14, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON, UTR5 ENSMUST00000137853 Zfx Rybak2015 chr9 59525734 59525871 + mmu_circ_0015741 137 137 2 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, intronic, OVCODE, OVEXON ENSMUST00000163694 Pkm2 Rybak2015 chr13 28975183 28986213 - mmu_circ_0004559 11030 9464 3 3 4 36 P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ncRNA, OVEXON, upstream_start ENSMUST00000148885 2610307P16Rik Rybak2015 chr15 39398488 39448056 + mmu_circ_0000595 49568 516 2 2 10 24 mm_head, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_053271 Rims2 Memczak2013, Rybak2015 chr14 31383388 31383519 + mmu_circ_0005176 131 131 2 2 85 87 P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000022529 Tkt Rybak2015 chr14 35543734 35544795 + mmu_circ_0005221 1061 213 2 2 43 51 forebrain, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000048263 Wapal Rybak2015 chr9 3441054 3460131 + mmu_circ_0015534 19077 1000 2 2 14 13 P19_exp2_D12, sy_cell, P19_exp2_D4, frontal_cortex, forebrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D01, P19_exp2_D0, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000027027 Cwf19l2 Rybak2015 chr1 135546425 135547592 + mmu_circ_0008182 1167 1167 3 3 0 0 P19_exp2_D0 NA ANTISENSE, coding, INTERNAL, intronic ENSMUST00000027736 Zc3h11a Rybak2015 chr17 84822371 84846065 - mmu_circ_0007064 23694 2421 3 3 104 19 P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000047524 Thada Rybak2015 chr18 35770524 35773156 + mmu_circ_0000861 2632 344 2 2 46 48 mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_026420 Paip2 Memczak2013, Rybak2015 chr5 111184415 111185785 - mmu_circ_0001388 1370 1370 2 2 22 16 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_029337 Ep400 Memczak2013, Rybak2015 chr17 21163678 21163846 - mmu_circ_0006563 168 168 2 2 0 0 P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000088811 Zfp160 Rybak2015 chr15 66067616 66067786 - mmu_circ_0005731 170 170 3 2 0 0 P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000070256 Kcnq3 Rybak2015